Protein–RNA interactions for Protein: Q9NRG0

CHRAC1, Chromatin accessibility complex protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRAC1Q9NRG0 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CHRAC1Q9NRG0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHRAC1Q9NRG0 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHRAC1Q9NRG0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.66■□□□□ 0.9
CHRAC1Q9NRG0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHRAC1Q9NRG0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHRAC1Q9NRG0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.65■□□□□ 0.9
CHRAC1Q9NRG0 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
CHRAC1Q9NRG0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRAC1Q9NRG0 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHRAC1Q9NRG0 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRAC1Q9NRG0 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRAC1Q9NRG0 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRAC1Q9NRG0 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CHRAC1Q9NRG0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHRAC1Q9NRG0 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.65■□□□□ 0.9
CHRAC1Q9NRG0 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRAC1Q9NRG0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHRAC1Q9NRG0 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHRAC1Q9NRG0 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.65■□□□□ 0.9
CHRAC1Q9NRG0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CHRAC1Q9NRG0 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHRAC1Q9NRG0 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.65■□□□□ 0.9
CHRAC1Q9NRG0 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRAC1Q9NRG0 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CHRAC1Q9NRG0 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CHRAC1Q9NRG0 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.65■□□□□ 0.9
CHRAC1Q9NRG0 AL391422.3-201ENST00000603791 2761 ntBASIC20.65■□□□□ 0.9
CHRAC1Q9NRG0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHRAC1Q9NRG0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.65■□□□□ 0.9
CHRAC1Q9NRG0 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHRAC1Q9NRG0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRAC1Q9NRG0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHRAC1Q9NRG0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHRAC1Q9NRG0 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CHRAC1Q9NRG0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHRAC1Q9NRG0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.64■□□□□ 0.89
CHRAC1Q9NRG0 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.64■□□□□ 0.89
CHRAC1Q9NRG0 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.64■□□□□ 0.89
CHRAC1Q9NRG0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.64■□□□□ 0.89
CHRAC1Q9NRG0 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.64■□□□□ 0.89
CHRAC1Q9NRG0 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHRAC1Q9NRG0 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHRAC1Q9NRG0 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHRAC1Q9NRG0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CHRAC1Q9NRG0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHRAC1Q9NRG0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CHRAC1Q9NRG0 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHRAC1Q9NRG0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHRAC1Q9NRG0 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHRAC1Q9NRG0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHRAC1Q9NRG0 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHRAC1Q9NRG0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHRAC1Q9NRG0 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHRAC1Q9NRG0 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHRAC1Q9NRG0 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.63■□□□□ 0.89
CHRAC1Q9NRG0 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHRAC1Q9NRG0 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.63■□□□□ 0.89
CHRAC1Q9NRG0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.63■□□□□ 0.89
CHRAC1Q9NRG0 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
CHRAC1Q9NRG0 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHRAC1Q9NRG0 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHRAC1Q9NRG0 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.63■□□□□ 0.89
CHRAC1Q9NRG0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHRAC1Q9NRG0 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.63■□□□□ 0.89
CHRAC1Q9NRG0 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHRAC1Q9NRG0 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHRAC1Q9NRG0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
CHRAC1Q9NRG0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHRAC1Q9NRG0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.62■□□□□ 0.89
CHRAC1Q9NRG0 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHRAC1Q9NRG0 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.62■□□□□ 0.89
CHRAC1Q9NRG0 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHRAC1Q9NRG0 AL512408.1-201ENST00000569378 2000 ntBASIC20.62■□□□□ 0.89
CHRAC1Q9NRG0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.62■□□□□ 0.89
CHRAC1Q9NRG0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CHRAC1Q9NRG0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CHRAC1Q9NRG0 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.62■□□□□ 0.89
CHRAC1Q9NRG0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.62■□□□□ 0.89
CHRAC1Q9NRG0 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.62■□□□□ 0.89
CHRAC1Q9NRG0 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.62■□□□□ 0.89
CHRAC1Q9NRG0 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.62■□□□□ 0.89
CHRAC1Q9NRG0 MYCNOS-205ENST00000641950 531 ntBASIC20.62■□□□□ 0.89
CHRAC1Q9NRG0 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.62■□□□□ 0.89
CHRAC1Q9NRG0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHRAC1Q9NRG0 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHRAC1Q9NRG0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHRAC1Q9NRG0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHRAC1Q9NRG0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
CHRAC1Q9NRG0 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHRAC1Q9NRG0 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.62■□□□□ 0.89
CHRAC1Q9NRG0 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHRAC1Q9NRG0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHRAC1Q9NRG0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CHRAC1Q9NRG0 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
CHRAC1Q9NRG0 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
CHRAC1Q9NRG0 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CHRAC1Q9NRG0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CHRAC1Q9NRG0 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHRAC1Q9NRG0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms