Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SEC61A2Q9H9S3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SEC61A2Q9H9S3 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SEC61A2Q9H9S3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SEC61A2Q9H9S3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SEC61A2Q9H9S3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.34■□□□□ 0.53
SEC61A2Q9H9S3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.34■□□□□ 0.53
SEC61A2Q9H9S3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.34■□□□□ 0.53
SEC61A2Q9H9S3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.34■□□□□ 0.53
SEC61A2Q9H9S3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.34■□□□□ 0.53
SEC61A2Q9H9S3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SEC61A2Q9H9S3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SEC61A2Q9H9S3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SEC61A2Q9H9S3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SEC61A2Q9H9S3 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SEC61A2Q9H9S3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.34■□□□□ 0.53
SEC61A2Q9H9S3 AC138932.1-201ENST00000534164 6830 ntBASIC18.34■□□□□ 0.53
SEC61A2Q9H9S3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SEC61A2Q9H9S3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SEC61A2Q9H9S3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SEC61A2Q9H9S3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SEC61A2Q9H9S3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.33■□□□□ 0.53
SEC61A2Q9H9S3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SEC61A2Q9H9S3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SEC61A2Q9H9S3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
SEC61A2Q9H9S3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SEC61A2Q9H9S3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SEC61A2Q9H9S3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.33■□□□□ 0.53
SEC61A2Q9H9S3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SEC61A2Q9H9S3 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SEC61A2Q9H9S3 AC245052.3-201ENST00000450182 901 ntBASIC18.33■□□□□ 0.52
SEC61A2Q9H9S3 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SEC61A2Q9H9S3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.33■□□□□ 0.52
SEC61A2Q9H9S3 AC011767.1-201ENST00000617410 1153 ntBASIC18.33■□□□□ 0.52
SEC61A2Q9H9S3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.33■□□□□ 0.52
SEC61A2Q9H9S3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SEC61A2Q9H9S3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.33■□□□□ 0.52
SEC61A2Q9H9S3 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SEC61A2Q9H9S3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SEC61A2Q9H9S3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SEC61A2Q9H9S3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SEC61A2Q9H9S3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SEC61A2Q9H9S3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SEC61A2Q9H9S3 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SEC61A2Q9H9S3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SEC61A2Q9H9S3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SEC61A2Q9H9S3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SEC61A2Q9H9S3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SEC61A2Q9H9S3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.32■□□□□ 0.52
SEC61A2Q9H9S3 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.32■□□□□ 0.52
SEC61A2Q9H9S3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SEC61A2Q9H9S3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SEC61A2Q9H9S3 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SEC61A2Q9H9S3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SEC61A2Q9H9S3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SEC61A2Q9H9S3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SEC61A2Q9H9S3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.32■□□□□ 0.52
SEC61A2Q9H9S3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SEC61A2Q9H9S3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SEC61A2Q9H9S3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SEC61A2Q9H9S3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.32■□□□□ 0.52
SEC61A2Q9H9S3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SEC61A2Q9H9S3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SEC61A2Q9H9S3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.31■□□□□ 0.52
SEC61A2Q9H9S3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SEC61A2Q9H9S3 RNF165-205ENST00000588679 2904 ntBASIC18.31■□□□□ 0.52
SEC61A2Q9H9S3 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SEC61A2Q9H9S3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SEC61A2Q9H9S3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SEC61A2Q9H9S3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SEC61A2Q9H9S3 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SEC61A2Q9H9S3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SEC61A2Q9H9S3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SEC61A2Q9H9S3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.31■□□□□ 0.52
SEC61A2Q9H9S3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.31■□□□□ 0.52
SEC61A2Q9H9S3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SEC61A2Q9H9S3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SEC61A2Q9H9S3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.31■□□□□ 0.52
SEC61A2Q9H9S3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
SEC61A2Q9H9S3 AC092667.1-201ENST00000434301 2586 ntBASIC18.31■□□□□ 0.52
SEC61A2Q9H9S3 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SEC61A2Q9H9S3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SEC61A2Q9H9S3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
SEC61A2Q9H9S3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.3■□□□□ 0.52
SEC61A2Q9H9S3 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SEC61A2Q9H9S3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
SEC61A2Q9H9S3 AL157384.1-201ENST00000445995 2473 ntBASIC18.3■□□□□ 0.52
SEC61A2Q9H9S3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
SEC61A2Q9H9S3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SEC61A2Q9H9S3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SEC61A2Q9H9S3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SEC61A2Q9H9S3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
SEC61A2Q9H9S3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.3■□□□□ 0.52
SEC61A2Q9H9S3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SEC61A2Q9H9S3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SEC61A2Q9H9S3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SEC61A2Q9H9S3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SEC61A2Q9H9S3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SEC61A2Q9H9S3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.3■□□□□ 0.52
SEC61A2Q9H9S3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms