Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
KRTAP3-3Q9BYR6 AC137630.4-201ENST00000609473 479 ntBASIC12.63□□□□□ -0.39
KRTAP3-3Q9BYR6 AC007742.2-201ENST00000618226 398 ntBASIC12.63□□□□□ -0.39
KRTAP3-3Q9BYR6 AL355493.4-201ENST00000618530 292 ntBASIC12.63□□□□□ -0.39
KRTAP3-3Q9BYR6 AP003485.2-201ENST00000623636 610 ntBASIC12.63□□□□□ -0.39
KRTAP3-3Q9BYR6 AC012065.5-201ENST00000624084 510 ntBASIC12.63□□□□□ -0.39
KRTAP3-3Q9BYR6 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC12.63□□□□□ -0.39
KRTAP3-3Q9BYR6 LIAS-210ENST00000638451 1159 ntTSL 5 BASIC12.63□□□□□ -0.39
KRTAP3-3Q9BYR6 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
KRTAP3-3Q9BYR6 CTXN3-202ENST00000395322 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
KRTAP3-3Q9BYR6 CAMK2D-213ENST00000514328 1497 ntTSL 5 BASIC12.63□□□□□ -0.39
KRTAP3-3Q9BYR6 AC046158.4-201ENST00000623121 1347 ntBASIC12.62□□□□□ -0.39
KRTAP3-3Q9BYR6 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.62□□□□□ -0.39
KRTAP3-3Q9BYR6 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
KRTAP3-3Q9BYR6 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
KRTAP3-3Q9BYR6 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
KRTAP3-3Q9BYR6 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
KRTAP3-3Q9BYR6 MFSD8-243ENST00000641695 1455 ntBASIC12.62□□□□□ -0.39
KRTAP3-3Q9BYR6 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KRTAP3-3Q9BYR6 PRL-203ENST00000617911 1364 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
KRTAP3-3Q9BYR6 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KRTAP3-3Q9BYR6 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KRTAP3-3Q9BYR6 FCER1A-202ENST00000368115 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KRTAP3-3Q9BYR6 TCEAL9-202ENST00000372661 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KRTAP3-3Q9BYR6 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC12.62□□□□□ -0.39
KRTAP3-3Q9BYR6 VN1R37P-201ENST00000419096 748 ntBASIC12.62□□□□□ -0.39
KRTAP3-3Q9BYR6 ETF1P1-206ENST00000427296 984 ntBASIC12.62□□□□□ -0.39
KRTAP3-3Q9BYR6 KCNQ5-AS1-201ENST00000429832 1101 ntTSL 5 BASIC12.62□□□□□ -0.39
KRTAP3-3Q9BYR6 DLGAP5P1-201ENST00000430307 464 ntBASIC12.62□□□□□ -0.39
KRTAP3-3Q9BYR6 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC12.62□□□□□ -0.39
KRTAP3-3Q9BYR6 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC12.62□□□□□ -0.39
KRTAP3-3Q9BYR6 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
KRTAP3-3Q9BYR6 AL603839.3-201ENST00000450713 605 ntTSL 3 BASIC12.62□□□□□ -0.39
KRTAP3-3Q9BYR6 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC12.62□□□□□ -0.39
KRTAP3-3Q9BYR6 MTRF1LP2-201ENST00000506027 1122 ntBASIC12.62□□□□□ -0.39
KRTAP3-3Q9BYR6 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC12.62□□□□□ -0.39
KRTAP3-3Q9BYR6 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC12.62□□□□□ -0.39
KRTAP3-3Q9BYR6 AC090819.1-201ENST00000523800 1111 ntBASIC12.62□□□□□ -0.39
KRTAP3-3Q9BYR6 NDUFAF4P1-201ENST00000559425 519 ntBASIC12.62□□□□□ -0.39
KRTAP3-3Q9BYR6 PRELID3BP3-201ENST00000584963 545 ntBASIC12.62□□□□□ -0.39
KRTAP3-3Q9BYR6 AC100843.2-201ENST00000589084 324 ntTSL 5 BASIC12.62□□□□□ -0.39
KRTAP3-3Q9BYR6 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC12.62□□□□□ -0.39
KRTAP3-3Q9BYR6 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC12.62□□□□□ -0.39
KRTAP3-3Q9BYR6 AC093159.2-201ENST00000603429 636 ntBASIC12.62□□□□□ -0.39
KRTAP3-3Q9BYR6 NUDT7-207ENST00000613075 1073 ntTSL 3 BASIC12.62□□□□□ -0.39
KRTAP3-3Q9BYR6 AC010333.3-201ENST00000615100 402 ntBASIC12.62□□□□□ -0.39
KRTAP3-3Q9BYR6 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
KRTAP3-3Q9BYR6 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KRTAP3-3Q9BYR6 ORC5-203ENST00000447452 1409 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
KRTAP3-3Q9BYR6 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC12.62□□□□□ -0.39
KRTAP3-3Q9BYR6 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
KRTAP3-3Q9BYR6 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KRTAP3-3Q9BYR6 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
KRTAP3-3Q9BYR6 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
KRTAP3-3Q9BYR6 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KRTAP3-3Q9BYR6 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KRTAP3-3Q9BYR6 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC12.61□□□□□ -0.39
KRTAP3-3Q9BYR6 RNU1-38P-201ENST00000362817 144 ntBASIC12.61□□□□□ -0.39
KRTAP3-3Q9BYR6 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
KRTAP3-3Q9BYR6 CCL7-201ENST00000378569 810 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KRTAP3-3Q9BYR6 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KRTAP3-3Q9BYR6 IGLC2-201ENST00000390323 462 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
KRTAP3-3Q9BYR6 IGLC3-201ENST00000390325 462 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
KRTAP3-3Q9BYR6 CCL7-202ENST00000394627 696 ntTSL 3 BASIC12.61□□□□□ -0.39
KRTAP3-3Q9BYR6 MDH1-202ENST00000409476 808 ntTSL 5 BASIC12.61□□□□□ -0.39
KRTAP3-3Q9BYR6 MDH1-203ENST00000409908 700 ntTSL 3 BASIC12.61□□□□□ -0.39
KRTAP3-3Q9BYR6 AC091862.1-201ENST00000438016 1100 ntBASIC12.61□□□□□ -0.39
KRTAP3-3Q9BYR6 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC12.61□□□□□ -0.39
KRTAP3-3Q9BYR6 CREM-237ENST00000488328 1049 ntTSL 2 BASIC12.61□□□□□ -0.39
KRTAP3-3Q9BYR6 AC105391.1-201ENST00000503155 1045 ntBASIC12.61□□□□□ -0.39
KRTAP3-3Q9BYR6 AC105185.1-201ENST00000518705 535 ntBASIC12.61□□□□□ -0.39
KRTAP3-3Q9BYR6 EMSY-217ENST00000533988 934 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
KRTAP3-3Q9BYR6 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC12.61□□□□□ -0.39
KRTAP3-3Q9BYR6 AC011773.4-202ENST00000566000 1264 ntBASIC12.61□□□□□ -0.39
KRTAP3-3Q9BYR6 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC12.61□□□□□ -0.39
KRTAP3-3Q9BYR6 BNIP3P32-201ENST00000600015 554 ntBASIC12.61□□□□□ -0.39
KRTAP3-3Q9BYR6 AC024941.1-201ENST00000612250 334 ntBASIC12.61□□□□□ -0.39
KRTAP3-3Q9BYR6 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
KRTAP3-3Q9BYR6 AC105053.1-201ENST00000366278 1711 ntTSL 2 BASIC12.61□□□□□ -0.39
KRTAP3-3Q9BYR6 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
KRTAP3-3Q9BYR6 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KRTAP3-3Q9BYR6 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC12.61□□□□□ -0.39
KRTAP3-3Q9BYR6 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC12.61□□□□□ -0.39
KRTAP3-3Q9BYR6 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
KRTAP3-3Q9BYR6 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC12.61□□□□□ -0.39
KRTAP3-3Q9BYR6 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.61□□□□□ -0.39
KRTAP3-3Q9BYR6 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KRTAP3-3Q9BYR6 LINC01747-203ENST00000634603 1377 ntTSL 4 BASIC12.6□□□□□ -0.39
KRTAP3-3Q9BYR6 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
KRTAP3-3Q9BYR6 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
KRTAP3-3Q9BYR6 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
KRTAP3-3Q9BYR6 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KRTAP3-3Q9BYR6 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
KRTAP3-3Q9BYR6 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
KRTAP3-3Q9BYR6 CBR1-202ENST00000399191 838 ntTSL 3 BASIC12.6□□□□□ -0.39
KRTAP3-3Q9BYR6 ANKRD30BL-202ENST00000409867 1251 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
KRTAP3-3Q9BYR6 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC12.6□□□□□ -0.39
KRTAP3-3Q9BYR6 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
KRTAP3-3Q9BYR6 AL589823.1-201ENST00000429577 183 ntBASIC12.6□□□□□ -0.39
KRTAP3-3Q9BYR6 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms