Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
RTFDC1Q9BY42 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
RTFDC1Q9BY42 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
RTFDC1Q9BY42 AC239809.2-201ENST00000415381 517 ntBASIC25.14■■□□□ 1.62
RTFDC1Q9BY42 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC25.14■■□□□ 1.62
RTFDC1Q9BY42 BRWD1-AS2-201ENST00000603064 1028 ntBASIC25.14■■□□□ 1.62
RTFDC1Q9BY42 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC25.14■■□□□ 1.61
RTFDC1Q9BY42 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC25.14■■□□□ 1.61
RTFDC1Q9BY42 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RTFDC1Q9BY42 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RTFDC1Q9BY42 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC25.13■■□□□ 1.61
RTFDC1Q9BY42 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RTFDC1Q9BY42 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC25.13■■□□□ 1.61
RTFDC1Q9BY42 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RTFDC1Q9BY42 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC25.13■■□□□ 1.61
RTFDC1Q9BY42 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
RTFDC1Q9BY42 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
RTFDC1Q9BY42 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RTFDC1Q9BY42 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
RTFDC1Q9BY42 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC25.13■■□□□ 1.61
RTFDC1Q9BY42 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
RTFDC1Q9BY42 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RTFDC1Q9BY42 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC25.13■■□□□ 1.61
RTFDC1Q9BY42 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC25.13■■□□□ 1.61
RTFDC1Q9BY42 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC25.13■■□□□ 1.61
RTFDC1Q9BY42 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC25.13■■□□□ 1.61
RTFDC1Q9BY42 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
RTFDC1Q9BY42 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RTFDC1Q9BY42 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC25.12■■□□□ 1.61
RTFDC1Q9BY42 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RTFDC1Q9BY42 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RTFDC1Q9BY42 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC25.12■■□□□ 1.61
RTFDC1Q9BY42 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
RTFDC1Q9BY42 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RTFDC1Q9BY42 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC25.12■■□□□ 1.61
RTFDC1Q9BY42 DHDH-203ENST00000522614 776 ntTSL 5 BASIC25.12■■□□□ 1.61
RTFDC1Q9BY42 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RTFDC1Q9BY42 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RTFDC1Q9BY42 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
RTFDC1Q9BY42 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RTFDC1Q9BY42 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC25.12■■□□□ 1.61
RTFDC1Q9BY42 AC113410.3-201ENST00000623366 203 ntBASIC25.12■■□□□ 1.61
RTFDC1Q9BY42 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RTFDC1Q9BY42 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
RTFDC1Q9BY42 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RTFDC1Q9BY42 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RTFDC1Q9BY42 AC242852.2-201ENST00000615738 1807 ntBASIC25.12■■□□□ 1.61
RTFDC1Q9BY42 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RTFDC1Q9BY42 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RTFDC1Q9BY42 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
RTFDC1Q9BY42 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
RTFDC1Q9BY42 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC25.11■■□□□ 1.61
RTFDC1Q9BY42 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
RTFDC1Q9BY42 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
RTFDC1Q9BY42 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
RTFDC1Q9BY42 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
RTFDC1Q9BY42 TSPY15P-201ENST00000457163 923 ntBASIC25.11■■□□□ 1.61
RTFDC1Q9BY42 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC25.11■■□□□ 1.61
RTFDC1Q9BY42 AC012306.2-201ENST00000609350 630 ntBASIC25.11■■□□□ 1.61
RTFDC1Q9BY42 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
RTFDC1Q9BY42 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC25.11■■□□□ 1.61
RTFDC1Q9BY42 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC25.11■■□□□ 1.61
RTFDC1Q9BY42 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
RTFDC1Q9BY42 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
RTFDC1Q9BY42 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RTFDC1Q9BY42 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RTFDC1Q9BY42 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RTFDC1Q9BY42 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RTFDC1Q9BY42 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC25.1■■□□□ 1.61
RTFDC1Q9BY42 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC25.1■■□□□ 1.61
RTFDC1Q9BY42 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC25.1■■□□□ 1.61
RTFDC1Q9BY42 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC25.1■■□□□ 1.61
RTFDC1Q9BY42 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC25.1■■□□□ 1.61
RTFDC1Q9BY42 RARRES2P10-201ENST00000564312 460 ntBASIC25.1■■□□□ 1.61
RTFDC1Q9BY42 MIR4785-201ENST00000585005 73 ntBASIC25.1■■□□□ 1.61
RTFDC1Q9BY42 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC25.1■■□□□ 1.61
RTFDC1Q9BY42 AC006557.6-201ENST00000623071 864 ntBASIC25.1■■□□□ 1.61
RTFDC1Q9BY42 AC097493.4-201ENST00000641197 219 ntBASIC25.1■■□□□ 1.61
RTFDC1Q9BY42 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RTFDC1Q9BY42 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
RTFDC1Q9BY42 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RTFDC1Q9BY42 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RTFDC1Q9BY42 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RTFDC1Q9BY42 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RTFDC1Q9BY42 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC25.09■■□□□ 1.61
RTFDC1Q9BY42 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
RTFDC1Q9BY42 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC25.09■■□□□ 1.61
RTFDC1Q9BY42 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RTFDC1Q9BY42 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC25.09■■□□□ 1.61
RTFDC1Q9BY42 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC25.09■■□□□ 1.61
RTFDC1Q9BY42 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
RTFDC1Q9BY42 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
RTFDC1Q9BY42 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
RTFDC1Q9BY42 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RTFDC1Q9BY42 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
RTFDC1Q9BY42 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC25.09■■□□□ 1.61
RTFDC1Q9BY42 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC25.09■■□□□ 1.61
RTFDC1Q9BY42 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
RTFDC1Q9BY42 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RTFDC1Q9BY42 GUSBP5-202ENST00000510805 1989 ntBASIC25.08■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms