Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.41■■□□□ 1.02
TRIM62Q9BVG3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.41■■□□□ 1.02
TRIM62Q9BVG3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM62Q9BVG3 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM62Q9BVG3 KRT18P68-201ENST00000392293 1000 ntBASIC21.41■■□□□ 1.02
TRIM62Q9BVG3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM62Q9BVG3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.41■■□□□ 1.02
TRIM62Q9BVG3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.41■■□□□ 1.02
TRIM62Q9BVG3 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.41■■□□□ 1.02
TRIM62Q9BVG3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.41■■□□□ 1.02
TRIM62Q9BVG3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
TRIM62Q9BVG3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM62Q9BVG3 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.41■■□□□ 1.02
TRIM62Q9BVG3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.41■■□□□ 1.02
TRIM62Q9BVG3 AC007375.3-201ENST00000600936 2314 ntBASIC21.41■■□□□ 1.02
TRIM62Q9BVG3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM62Q9BVG3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM62Q9BVG3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.41■■□□□ 1.02
TRIM62Q9BVG3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.4■■□□□ 1.02
TRIM62Q9BVG3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
TRIM62Q9BVG3 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM62Q9BVG3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.4■■□□□ 1.02
TRIM62Q9BVG3 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM62Q9BVG3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM62Q9BVG3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM62Q9BVG3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM62Q9BVG3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM62Q9BVG3 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM62Q9BVG3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
TRIM62Q9BVG3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM62Q9BVG3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM62Q9BVG3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM62Q9BVG3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.4■■□□□ 1.02
TRIM62Q9BVG3 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
TRIM62Q9BVG3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.4■■□□□ 1.02
TRIM62Q9BVG3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM62Q9BVG3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.4■■□□□ 1.02
TRIM62Q9BVG3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
TRIM62Q9BVG3 AC005229.4-201ENST00000610085 2198 ntBASIC21.4■■□□□ 1.02
TRIM62Q9BVG3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM62Q9BVG3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TRIM62Q9BVG3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.39■■□□□ 1.02
TRIM62Q9BVG3 PLK5-205ENST00000642079 1969 ntBASIC21.39■■□□□ 1.02
TRIM62Q9BVG3 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
TRIM62Q9BVG3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TRIM62Q9BVG3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM62Q9BVG3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.39■■□□□ 1.01
TRIM62Q9BVG3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM62Q9BVG3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.39■■□□□ 1.01
TRIM62Q9BVG3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
TRIM62Q9BVG3 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
TRIM62Q9BVG3 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.39■■□□□ 1.01
TRIM62Q9BVG3 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.39■■□□□ 1.01
TRIM62Q9BVG3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
TRIM62Q9BVG3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM62Q9BVG3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM62Q9BVG3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM62Q9BVG3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.39■■□□□ 1.01
TRIM62Q9BVG3 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
TRIM62Q9BVG3 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM62Q9BVG3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM62Q9BVG3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM62Q9BVG3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.38■■□□□ 1.01
TRIM62Q9BVG3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM62Q9BVG3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
TRIM62Q9BVG3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.38■■□□□ 1.01
TRIM62Q9BVG3 MIR4758-201ENST00000577688 71 ntBASIC21.38■■□□□ 1.01
TRIM62Q9BVG3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.38■■□□□ 1.01
TRIM62Q9BVG3 AC104771.1-201ENST00000603335 964 ntBASIC21.38■■□□□ 1.01
TRIM62Q9BVG3 MIR2861-201ENST00000636310 90 ntBASIC21.38■■□□□ 1.01
TRIM62Q9BVG3 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.38■■□□□ 1.01
TRIM62Q9BVG3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
TRIM62Q9BVG3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIM62Q9BVG3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
TRIM62Q9BVG3 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.38■■□□□ 1.01
TRIM62Q9BVG3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
TRIM62Q9BVG3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.37■■□□□ 1.01
TRIM62Q9BVG3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM62Q9BVG3 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM62Q9BVG3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.37■■□□□ 1.01
TRIM62Q9BVG3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
TRIM62Q9BVG3 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
TRIM62Q9BVG3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM62Q9BVG3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM62Q9BVG3 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM62Q9BVG3 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
TRIM62Q9BVG3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
TRIM62Q9BVG3 LSM12P1-201ENST00000411836 588 ntBASIC21.37■■□□□ 1.01
TRIM62Q9BVG3 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
TRIM62Q9BVG3 GUSBP6-202ENST00000438529 1198 ntBASIC21.37■■□□□ 1.01
TRIM62Q9BVG3 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.37■■□□□ 1.01
TRIM62Q9BVG3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.37■■□□□ 1.01
TRIM62Q9BVG3 AC092118.2-201ENST00000613495 667 ntBASIC21.37■■□□□ 1.01
TRIM62Q9BVG3 AL356652.1-201ENST00000615962 565 ntBASIC21.37■■□□□ 1.01
TRIM62Q9BVG3 AC105020.6-201ENST00000621523 1217 ntBASIC21.37■■□□□ 1.01
TRIM62Q9BVG3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.37■■□□□ 1.01
TRIM62Q9BVG3 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM62Q9BVG3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM62Q9BVG3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM62Q9BVG3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms