Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
LRRC58Q96CX6 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
LRRC58Q96CX6 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.48■□□□□ 0.71
LRRC58Q96CX6 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC58Q96CX6 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC58Q96CX6 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC58Q96CX6 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC58Q96CX6 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
LRRC58Q96CX6 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC58Q96CX6 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.48■□□□□ 0.71
LRRC58Q96CX6 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC58Q96CX6 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.48■□□□□ 0.71
LRRC58Q96CX6 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
LRRC58Q96CX6 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC58Q96CX6 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC58Q96CX6 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.48■□□□□ 0.71
LRRC58Q96CX6 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC58Q96CX6 AC087289.5-201ENST00000586076 3175 ntBASIC19.48■□□□□ 0.71
LRRC58Q96CX6 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
LRRC58Q96CX6 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
LRRC58Q96CX6 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
LRRC58Q96CX6 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.48■□□□□ 0.71
LRRC58Q96CX6 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.48■□□□□ 0.71
LRRC58Q96CX6 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC58Q96CX6 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC58Q96CX6 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
LRRC58Q96CX6 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
LRRC58Q96CX6 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC58Q96CX6 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.47■□□□□ 0.71
LRRC58Q96CX6 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC58Q96CX6 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
LRRC58Q96CX6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC58Q96CX6 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC58Q96CX6 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.47■□□□□ 0.71
LRRC58Q96CX6 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.47■□□□□ 0.71
LRRC58Q96CX6 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC58Q96CX6 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.47■□□□□ 0.71
LRRC58Q96CX6 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.47■□□□□ 0.71
LRRC58Q96CX6 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC58Q96CX6 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
LRRC58Q96CX6 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.47■□□□□ 0.71
LRRC58Q96CX6 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.47■□□□□ 0.71
LRRC58Q96CX6 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC58Q96CX6 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC58Q96CX6 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC58Q96CX6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC58Q96CX6 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC58Q96CX6 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC58Q96CX6 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.47■□□□□ 0.71
LRRC58Q96CX6 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
LRRC58Q96CX6 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
LRRC58Q96CX6 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC58Q96CX6 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC58Q96CX6 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC58Q96CX6 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC58Q96CX6 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC58Q96CX6 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC58Q96CX6 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
LRRC58Q96CX6 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC58Q96CX6 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC58Q96CX6 AL136116.3-201ENST00000402907 1138 ntBASIC19.46■□□□□ 0.71
LRRC58Q96CX6 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC58Q96CX6 AC024257.2-201ENST00000549699 147 ntBASIC19.46■□□□□ 0.71
LRRC58Q96CX6 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.46■□□□□ 0.71
LRRC58Q96CX6 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.46■□□□□ 0.71
LRRC58Q96CX6 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC58Q96CX6 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC58Q96CX6 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC58Q96CX6 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC58Q96CX6 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRRC58Q96CX6 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRRC58Q96CX6 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LRRC58Q96CX6 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
LRRC58Q96CX6 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
LRRC58Q96CX6 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LRRC58Q96CX6 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRRC58Q96CX6 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.45■□□□□ 0.7
LRRC58Q96CX6 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRRC58Q96CX6 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRRC58Q96CX6 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
LRRC58Q96CX6 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRRC58Q96CX6 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LRRC58Q96CX6 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
LRRC58Q96CX6 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.44■□□□□ 0.7
LRRC58Q96CX6 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC58Q96CX6 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.44■□□□□ 0.7
LRRC58Q96CX6 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC58Q96CX6 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
LRRC58Q96CX6 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.44■□□□□ 0.7
LRRC58Q96CX6 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.44■□□□□ 0.7
LRRC58Q96CX6 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
LRRC58Q96CX6 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC58Q96CX6 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC58Q96CX6 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC58Q96CX6 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC58Q96CX6 AC008764.7-201ENST00000593779 1081 ntBASIC19.44■□□□□ 0.7
LRRC58Q96CX6 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.44■□□□□ 0.7
LRRC58Q96CX6 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.44■□□□□ 0.7
LRRC58Q96CX6 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC58Q96CX6 TSPY26P-201ENST00000476365 1326 ntBASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms