Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
TNFRSF25Q93038 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
TNFRSF25Q93038 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC23.41■■□□□ 1.34
TNFRSF25Q93038 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
TNFRSF25Q93038 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC23.41■■□□□ 1.34
TNFRSF25Q93038 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC23.41■■□□□ 1.34
TNFRSF25Q93038 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TNFRSF25Q93038 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC23.4■■□□□ 1.34
TNFRSF25Q93038 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TNFRSF25Q93038 CROCCP5-201ENST00000436658 830 ntBASIC23.4■■□□□ 1.34
TNFRSF25Q93038 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
TNFRSF25Q93038 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TNFRSF25Q93038 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TNFRSF25Q93038 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
TNFRSF25Q93038 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
TNFRSF25Q93038 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TNFRSF25Q93038 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TNFRSF25Q93038 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC23.4■■□□□ 1.34
TNFRSF25Q93038 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
TNFRSF25Q93038 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC23.39■■□□□ 1.34
TNFRSF25Q93038 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
TNFRSF25Q93038 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TNFRSF25Q93038 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
TNFRSF25Q93038 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
TNFRSF25Q93038 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC23.39■■□□□ 1.33
TNFRSF25Q93038 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC23.39■■□□□ 1.33
TNFRSF25Q93038 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC23.39■■□□□ 1.33
TNFRSF25Q93038 AC005181.1-201ENST00000604782 1256 ntBASIC23.39■■□□□ 1.33
TNFRSF25Q93038 AC092666.2-201ENST00000613287 246 ntBASIC23.39■■□□□ 1.33
TNFRSF25Q93038 KRT8P36-201ENST00000489121 1440 ntBASIC23.39■■□□□ 1.33
TNFRSF25Q93038 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC23.39■■□□□ 1.33
TNFRSF25Q93038 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TNFRSF25Q93038 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
TNFRSF25Q93038 AC092667.1-201ENST00000434301 2586 ntBASIC23.39■■□□□ 1.33
TNFRSF25Q93038 GABARAPL3-202ENST00000624044 1851 ntBASIC23.39■■□□□ 1.33
TNFRSF25Q93038 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC23.38■■□□□ 1.33
TNFRSF25Q93038 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC23.38■■□□□ 1.33
TNFRSF25Q93038 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC23.38■■□□□ 1.33
TNFRSF25Q93038 LINC01006-201ENST00000333319 2292 ntBASIC23.38■■□□□ 1.33
TNFRSF25Q93038 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
TNFRSF25Q93038 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC23.38■■□□□ 1.33
TNFRSF25Q93038 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
TNFRSF25Q93038 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
TNFRSF25Q93038 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TNFRSF25Q93038 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC23.38■■□□□ 1.33
TNFRSF25Q93038 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TNFRSF25Q93038 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC23.38■■□□□ 1.33
TNFRSF25Q93038 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TNFRSF25Q93038 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC23.38■■□□□ 1.33
TNFRSF25Q93038 AC087633.2-202ENST00000565166 1439 ntBASIC23.38■■□□□ 1.33
TNFRSF25Q93038 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
TNFRSF25Q93038 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TNFRSF25Q93038 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
TNFRSF25Q93038 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TNFRSF25Q93038 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TNFRSF25Q93038 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TNFRSF25Q93038 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TNFRSF25Q93038 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TNFRSF25Q93038 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TNFRSF25Q93038 AC026185.1-201ENST00000445748 174 ntBASIC23.37■■□□□ 1.33
TNFRSF25Q93038 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC23.37■■□□□ 1.33
TNFRSF25Q93038 AC100791.3-201ENST00000617619 330 ntBASIC23.37■■□□□ 1.33
TNFRSF25Q93038 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.37■■□□□ 1.33
TNFRSF25Q93038 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
TNFRSF25Q93038 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC23.37■■□□□ 1.33
TNFRSF25Q93038 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC23.37■■□□□ 1.33
TNFRSF25Q93038 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TNFRSF25Q93038 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TNFRSF25Q93038 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TNFRSF25Q93038 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC23.36■■□□□ 1.33
TNFRSF25Q93038 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TNFRSF25Q93038 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
TNFRSF25Q93038 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC23.36■■□□□ 1.33
TNFRSF25Q93038 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TNFRSF25Q93038 AC020907.5-201ENST00000624372 1936 ntBASIC23.36■■□□□ 1.33
TNFRSF25Q93038 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
TNFRSF25Q93038 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TNFRSF25Q93038 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TNFRSF25Q93038 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TNFRSF25Q93038 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TNFRSF25Q93038 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC23.36■■□□□ 1.33
TNFRSF25Q93038 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC23.36■■□□□ 1.33
TNFRSF25Q93038 AC093787.1-201ENST00000450396 207 ntBASIC23.36■■□□□ 1.33
TNFRSF25Q93038 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC23.36■■□□□ 1.33
TNFRSF25Q93038 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC23.36■■□□□ 1.33
TNFRSF25Q93038 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC23.36■■□□□ 1.33
TNFRSF25Q93038 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TNFRSF25Q93038 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TNFRSF25Q93038 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
TNFRSF25Q93038 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TNFRSF25Q93038 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC23.35■■□□□ 1.33
TNFRSF25Q93038 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TNFRSF25Q93038 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TNFRSF25Q93038 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TNFRSF25Q93038 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TNFRSF25Q93038 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC23.35■■□□□ 1.33
TNFRSF25Q93038 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC23.35■■□□□ 1.33
TNFRSF25Q93038 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC23.35■■□□□ 1.33
TNFRSF25Q93038 OR10C1-204ENST00000622521 1039 ntBASIC23.35■■□□□ 1.33
TNFRSF25Q93038 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC23.35■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms