Protein–RNA interactions for Protein: Q93009

USP7, Ubiquitin carboxyl-terminal hydrolase 7, humanhuman

Predictions only

Length 1,102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP7Q93009 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
USP7Q93009 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
USP7Q93009 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP7Q93009 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP7Q93009 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.22■□□□□ 0.83
USP7Q93009 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
USP7Q93009 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP7Q93009 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP7Q93009 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.22■□□□□ 0.83
USP7Q93009 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP7Q93009 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
USP7Q93009 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.22■□□□□ 0.83
USP7Q93009 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP7Q93009 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
USP7Q93009 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
USP7Q93009 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP7Q93009 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP7Q93009 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
USP7Q93009 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP7Q93009 MKRN4P-201ENST00000444706 1521 ntBASIC20.22■□□□□ 0.83
USP7Q93009 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
USP7Q93009 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
USP7Q93009 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP7Q93009 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
USP7Q93009 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP7Q93009 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.21■□□□□ 0.83
USP7Q93009 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
USP7Q93009 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.21■□□□□ 0.83
USP7Q93009 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
USP7Q93009 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
USP7Q93009 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.21■□□□□ 0.83
USP7Q93009 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.21■□□□□ 0.83
USP7Q93009 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
USP7Q93009 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.21■□□□□ 0.83
USP7Q93009 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP7Q93009 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
USP7Q93009 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP7Q93009 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
USP7Q93009 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.21■□□□□ 0.83
USP7Q93009 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP7Q93009 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP7Q93009 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
USP7Q93009 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.21■□□□□ 0.83
USP7Q93009 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
USP7Q93009 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
USP7Q93009 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
USP7Q93009 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.21■□□□□ 0.83
USP7Q93009 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP7Q93009 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP7Q93009 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.2■□□□□ 0.83
USP7Q93009 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP7Q93009 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP7Q93009 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.2■□□□□ 0.82
USP7Q93009 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP7Q93009 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP7Q93009 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP7Q93009 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP7Q93009 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.2■□□□□ 0.82
USP7Q93009 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
USP7Q93009 MIPEPP3-201ENST00000412105 444 ntBASIC20.2■□□□□ 0.82
USP7Q93009 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
USP7Q93009 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP7Q93009 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.2■□□□□ 0.82
USP7Q93009 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP7Q93009 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.2■□□□□ 0.82
USP7Q93009 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
USP7Q93009 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.2■□□□□ 0.82
USP7Q93009 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.2■□□□□ 0.82
USP7Q93009 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP7Q93009 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.2■□□□□ 0.82
USP7Q93009 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP7Q93009 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP7Q93009 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
USP7Q93009 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.2■□□□□ 0.82
USP7Q93009 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
USP7Q93009 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.19■□□□□ 0.82
USP7Q93009 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP7Q93009 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP7Q93009 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.19■□□□□ 0.82
USP7Q93009 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP7Q93009 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
USP7Q93009 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP7Q93009 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.19■□□□□ 0.82
USP7Q93009 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.19■□□□□ 0.82
USP7Q93009 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.19■□□□□ 0.82
USP7Q93009 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.19■□□□□ 0.82
USP7Q93009 RNA5SP413-201ENST00000516373 109 ntBASIC20.19■□□□□ 0.82
USP7Q93009 AC008694.1-202ENST00000636953 945 ntBASIC20.19■□□□□ 0.82
USP7Q93009 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
USP7Q93009 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
USP7Q93009 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
USP7Q93009 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.19■□□□□ 0.82
USP7Q93009 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.19■□□□□ 0.82
USP7Q93009 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP7Q93009 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP7Q93009 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP7Q93009 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP7Q93009 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP7Q93009 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.18■□□□□ 0.82
USP7Q93009 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms