Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 RBM42-202ENST00000586618 771 ntTSL 3 BASIC30.77■■■□□ 2.52
ABCA6Q8N139 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
ABCA6Q8N139 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC30.77■■■□□ 2.52
ABCA6Q8N139 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
ABCA6Q8N139 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC30.77■■■□□ 2.52
ABCA6Q8N139 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
ABCA6Q8N139 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC30.76■■■□□ 2.52
ABCA6Q8N139 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC30.76■■■□□ 2.52
ABCA6Q8N139 AC145285.6-201ENST00000604632 637 ntBASIC30.76■■■□□ 2.52
ABCA6Q8N139 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
ABCA6Q8N139 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.52
ABCA6Q8N139 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC30.76■■■□□ 2.51
ABCA6Q8N139 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
ABCA6Q8N139 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
ABCA6Q8N139 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
ABCA6Q8N139 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC30.76■■■□□ 2.51
ABCA6Q8N139 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC30.76■■■□□ 2.51
ABCA6Q8N139 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
ABCA6Q8N139 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
ABCA6Q8N139 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
ABCA6Q8N139 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC30.74■■■□□ 2.51
ABCA6Q8N139 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
ABCA6Q8N139 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC30.74■■■□□ 2.51
ABCA6Q8N139 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC30.74■■■□□ 2.51
ABCA6Q8N139 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC30.74■■■□□ 2.51
ABCA6Q8N139 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
ABCA6Q8N139 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
ABCA6Q8N139 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC30.73■■■□□ 2.51
ABCA6Q8N139 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
ABCA6Q8N139 HES2-206ENST00000489730 730 ntTSL 2 BASIC30.73■■■□□ 2.51
ABCA6Q8N139 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC30.73■■■□□ 2.51
ABCA6Q8N139 AF186192.3-201ENST00000583427 947 ntBASIC30.73■■■□□ 2.51
ABCA6Q8N139 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC30.73■■■□□ 2.51
ABCA6Q8N139 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
ABCA6Q8N139 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
ABCA6Q8N139 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
ABCA6Q8N139 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC30.73■■■□□ 2.51
ABCA6Q8N139 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
ABCA6Q8N139 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC30.73■■■□□ 2.51
ABCA6Q8N139 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
ABCA6Q8N139 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
ABCA6Q8N139 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC30.73■■■□□ 2.51
ABCA6Q8N139 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC30.73■■■□□ 2.51
ABCA6Q8N139 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
ABCA6Q8N139 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC30.72■■■□□ 2.51
ABCA6Q8N139 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
ABCA6Q8N139 NUDT16P1-203ENST00000513809 620 ntBASIC30.72■■■□□ 2.51
ABCA6Q8N139 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC30.72■■■□□ 2.51
ABCA6Q8N139 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC30.72■■■□□ 2.51
ABCA6Q8N139 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
ABCA6Q8N139 AC080038.3-201ENST00000623346 1952 ntBASIC30.72■■■□□ 2.51
ABCA6Q8N139 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC30.71■■■□□ 2.51
ABCA6Q8N139 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC30.71■■■□□ 2.51
ABCA6Q8N139 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC30.71■■■□□ 2.51
ABCA6Q8N139 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
ABCA6Q8N139 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
ABCA6Q8N139 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC30.71■■■□□ 2.51
ABCA6Q8N139 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
ABCA6Q8N139 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC30.71■■■□□ 2.51
ABCA6Q8N139 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC30.71■■■□□ 2.51
ABCA6Q8N139 AC113347.1-201ENST00000413321 391 ntBASIC30.71■■■□□ 2.51
ABCA6Q8N139 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC30.71■■■□□ 2.51
ABCA6Q8N139 RNF146-204ENST00000476956 884 ntTSL 2 BASIC30.71■■■□□ 2.51
ABCA6Q8N139 RPS15-203ENST00000586096 570 ntTSL 2 BASIC30.71■■■□□ 2.51
ABCA6Q8N139 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC30.71■■■□□ 2.51
ABCA6Q8N139 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC30.71■■■□□ 2.51
ABCA6Q8N139 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
ABCA6Q8N139 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
ABCA6Q8N139 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
ABCA6Q8N139 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC30.7■■■□□ 2.51
ABCA6Q8N139 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC30.7■■■□□ 2.51
ABCA6Q8N139 SAPCD2P4-201ENST00000424595 1171 ntBASIC30.7■■■□□ 2.51
ABCA6Q8N139 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC30.7■■■□□ 2.51
ABCA6Q8N139 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC30.7■■■□□ 2.51
ABCA6Q8N139 AL049597.2-201ENST00000565575 961 ntBASIC30.7■■■□□ 2.51
ABCA6Q8N139 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
ABCA6Q8N139 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC30.7■■■□□ 2.51
ABCA6Q8N139 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.5
ABCA6Q8N139 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
ABCA6Q8N139 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
ABCA6Q8N139 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
ABCA6Q8N139 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC30.69■■■□□ 2.5
ABCA6Q8N139 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
ABCA6Q8N139 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
ABCA6Q8N139 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
ABCA6Q8N139 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
ABCA6Q8N139 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
ABCA6Q8N139 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
ABCA6Q8N139 MMP23A-201ENST00000234610 1017 ntBASIC30.69■■■□□ 2.5
ABCA6Q8N139 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC30.69■■■□□ 2.5
ABCA6Q8N139 RBM17P1-201ENST00000453646 1190 ntBASIC30.69■■■□□ 2.5
ABCA6Q8N139 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC30.69■■■□□ 2.5
ABCA6Q8N139 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC30.69■■■□□ 2.5
ABCA6Q8N139 NT5C-211ENST00000582170 653 ntTSL 3 BASIC30.69■■■□□ 2.5
ABCA6Q8N139 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
ABCA6Q8N139 AC127496.7-201ENST00000625110 1798 ntBASIC30.68■■■□□ 2.5
ABCA6Q8N139 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC30.68■■■□□ 2.5
ABCA6Q8N139 KRT18P57-201ENST00000443599 1254 ntBASIC30.68■■■□□ 2.5
ABCA6Q8N139 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
ABCA6Q8N139 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms