Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CCDC60Q8IWA6 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC22.91■■□□□ 1.26
CCDC60Q8IWA6 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC22.91■■□□□ 1.26
CCDC60Q8IWA6 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
CCDC60Q8IWA6 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CCDC60Q8IWA6 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CCDC60Q8IWA6 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CCDC60Q8IWA6 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CCDC60Q8IWA6 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CCDC60Q8IWA6 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CCDC60Q8IWA6 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC22.9■■□□□ 1.26
CCDC60Q8IWA6 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.9■■□□□ 1.26
CCDC60Q8IWA6 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CCDC60Q8IWA6 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CCDC60Q8IWA6 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CCDC60Q8IWA6 GAS7-202ENST00000396115 929 ntTSL 5 BASIC22.9■■□□□ 1.26
CCDC60Q8IWA6 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CCDC60Q8IWA6 FAM201B-201ENST00000458407 597 ntBASIC22.9■■□□□ 1.26
CCDC60Q8IWA6 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC22.9■■□□□ 1.26
CCDC60Q8IWA6 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC22.9■■□□□ 1.26
CCDC60Q8IWA6 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC22.9■■□□□ 1.26
CCDC60Q8IWA6 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CCDC60Q8IWA6 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CCDC60Q8IWA6 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CCDC60Q8IWA6 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC22.9■■□□□ 1.26
CCDC60Q8IWA6 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC22.9■■□□□ 1.26
CCDC60Q8IWA6 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CCDC60Q8IWA6 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CCDC60Q8IWA6 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.26
CCDC60Q8IWA6 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC22.89■■□□□ 1.26
CCDC60Q8IWA6 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CCDC60Q8IWA6 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC22.89■■□□□ 1.25
CCDC60Q8IWA6 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC22.89■■□□□ 1.25
CCDC60Q8IWA6 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC22.89■■□□□ 1.25
CCDC60Q8IWA6 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC22.89■■□□□ 1.25
CCDC60Q8IWA6 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC22.89■■□□□ 1.25
CCDC60Q8IWA6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CCDC60Q8IWA6 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
CCDC60Q8IWA6 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.89■■□□□ 1.25
CCDC60Q8IWA6 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CCDC60Q8IWA6 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CCDC60Q8IWA6 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CCDC60Q8IWA6 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
CCDC60Q8IWA6 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CCDC60Q8IWA6 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CCDC60Q8IWA6 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CCDC60Q8IWA6 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC22.88■■□□□ 1.25
CCDC60Q8IWA6 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC22.88■■□□□ 1.25
CCDC60Q8IWA6 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CCDC60Q8IWA6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
CCDC60Q8IWA6 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
CCDC60Q8IWA6 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CCDC60Q8IWA6 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CCDC60Q8IWA6 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CCDC60Q8IWA6 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CCDC60Q8IWA6 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CCDC60Q8IWA6 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC22.87■■□□□ 1.25
CCDC60Q8IWA6 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC22.87■■□□□ 1.25
CCDC60Q8IWA6 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
CCDC60Q8IWA6 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC22.87■■□□□ 1.25
CCDC60Q8IWA6 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC22.87■■□□□ 1.25
CCDC60Q8IWA6 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CCDC60Q8IWA6 UNC93B5-201ENST00000530315 699 ntBASIC22.87■■□□□ 1.25
CCDC60Q8IWA6 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
CCDC60Q8IWA6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC22.87■■□□□ 1.25
CCDC60Q8IWA6 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CCDC60Q8IWA6 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CCDC60Q8IWA6 AC026310.3-201ENST00000625186 2373 ntBASIC22.86■■□□□ 1.25
CCDC60Q8IWA6 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22.86■■□□□ 1.25
CCDC60Q8IWA6 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
CCDC60Q8IWA6 NXN-202ENST00000537628 1340 ntTSL 3 BASIC22.86■■□□□ 1.25
CCDC60Q8IWA6 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC60Q8IWA6 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC60Q8IWA6 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC60Q8IWA6 AC060766.5-201ENST00000590539 871 ntBASIC22.86■■□□□ 1.25
CCDC60Q8IWA6 AL356652.1-201ENST00000615962 565 ntBASIC22.86■■□□□ 1.25
CCDC60Q8IWA6 HLA-B-256ENST00000639848 1089 ntBASIC22.86■■□□□ 1.25
CCDC60Q8IWA6 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC60Q8IWA6 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC60Q8IWA6 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC60Q8IWA6 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC60Q8IWA6 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC22.86■■□□□ 1.25
CCDC60Q8IWA6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
CCDC60Q8IWA6 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
CCDC60Q8IWA6 MFF-205ENST00000354503 1085 ntTSL 2 BASIC22.85■■□□□ 1.25
CCDC60Q8IWA6 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
CCDC60Q8IWA6 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CCDC60Q8IWA6 ESRRAP1-201ENST00000400596 1257 ntBASIC22.85■■□□□ 1.25
CCDC60Q8IWA6 HES2-205ENST00000487437 968 ntTSL 3 BASIC22.85■■□□□ 1.25
CCDC60Q8IWA6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC22.85■■□□□ 1.25
CCDC60Q8IWA6 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.85■■□□□ 1.25
CCDC60Q8IWA6 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
CCDC60Q8IWA6 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
CCDC60Q8IWA6 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CCDC60Q8IWA6 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22.84■■□□□ 1.25
CCDC60Q8IWA6 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC22.84■■□□□ 1.25
CCDC60Q8IWA6 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CCDC60Q8IWA6 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CCDC60Q8IWA6 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CCDC60Q8IWA6 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms