Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF135Q8IUD6 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.77■■□□□ 1.08
RNF135Q8IUD6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
RNF135Q8IUD6 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.77■■□□□ 1.08
RNF135Q8IUD6 AL445228.2-201ENST00000605589 952 ntBASIC21.77■■□□□ 1.08
RNF135Q8IUD6 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF135Q8IUD6 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RNF135Q8IUD6 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.77■■□□□ 1.08
RNF135Q8IUD6 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
RNF135Q8IUD6 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
RNF135Q8IUD6 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
RNF135Q8IUD6 AC026471.6-201ENST00000622954 1905 ntBASIC21.76■■□□□ 1.07
RNF135Q8IUD6 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.76■■□□□ 1.07
RNF135Q8IUD6 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF135Q8IUD6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.76■■□□□ 1.07
RNF135Q8IUD6 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.76■■□□□ 1.07
RNF135Q8IUD6 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.76■■□□□ 1.07
RNF135Q8IUD6 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF135Q8IUD6 AC012618.2-201ENST00000428058 849 ntBASIC21.76■■□□□ 1.07
RNF135Q8IUD6 AC233702.5-201ENST00000584107 538 ntBASIC21.76■■□□□ 1.07
RNF135Q8IUD6 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.76■■□□□ 1.07
RNF135Q8IUD6 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
RNF135Q8IUD6 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
RNF135Q8IUD6 AC069544.1-201ENST00000609399 999 ntBASIC21.76■■□□□ 1.07
RNF135Q8IUD6 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
RNF135Q8IUD6 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF135Q8IUD6 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
RNF135Q8IUD6 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF135Q8IUD6 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF135Q8IUD6 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF135Q8IUD6 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.75■■□□□ 1.07
RNF135Q8IUD6 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF135Q8IUD6 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RNF135Q8IUD6 AC092368.3-202ENST00000574180 1591 ntBASIC21.75■■□□□ 1.07
RNF135Q8IUD6 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF135Q8IUD6 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.75■■□□□ 1.07
RNF135Q8IUD6 RCN1P1-201ENST00000400413 996 ntBASIC21.75■■□□□ 1.07
RNF135Q8IUD6 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RNF135Q8IUD6 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.75■■□□□ 1.07
RNF135Q8IUD6 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.75■■□□□ 1.07
RNF135Q8IUD6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF135Q8IUD6 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.75■■□□□ 1.07
RNF135Q8IUD6 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RNF135Q8IUD6 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.75■■□□□ 1.07
RNF135Q8IUD6 AC092053.2-201ENST00000640557 1818 ntBASIC21.75■■□□□ 1.07
RNF135Q8IUD6 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RNF135Q8IUD6 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF135Q8IUD6 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RNF135Q8IUD6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF135Q8IUD6 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.75■■□□□ 1.07
RNF135Q8IUD6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF135Q8IUD6 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF135Q8IUD6 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RNF135Q8IUD6 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RNF135Q8IUD6 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RNF135Q8IUD6 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF135Q8IUD6 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF135Q8IUD6 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.74■■□□□ 1.07
RNF135Q8IUD6 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.74■■□□□ 1.07
RNF135Q8IUD6 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
RNF135Q8IUD6 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF135Q8IUD6 RPS2P55-201ENST00000397318 883 ntBASIC21.74■■□□□ 1.07
RNF135Q8IUD6 AC107956.1-201ENST00000494359 873 ntBASIC21.74■■□□□ 1.07
RNF135Q8IUD6 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RNF135Q8IUD6 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RNF135Q8IUD6 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.74■■□□□ 1.07
RNF135Q8IUD6 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.74■■□□□ 1.07
RNF135Q8IUD6 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF135Q8IUD6 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.74■■□□□ 1.07
RNF135Q8IUD6 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
RNF135Q8IUD6 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
RNF135Q8IUD6 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
RNF135Q8IUD6 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
RNF135Q8IUD6 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RNF135Q8IUD6 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
RNF135Q8IUD6 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
RNF135Q8IUD6 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF135Q8IUD6 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF135Q8IUD6 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.73■■□□□ 1.07
RNF135Q8IUD6 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.73■■□□□ 1.07
RNF135Q8IUD6 AC087499.1-201ENST00000418141 1075 ntBASIC21.73■■□□□ 1.07
RNF135Q8IUD6 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RNF135Q8IUD6 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.73■■□□□ 1.07
RNF135Q8IUD6 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF135Q8IUD6 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.73■■□□□ 1.07
RNF135Q8IUD6 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF135Q8IUD6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.73■■□□□ 1.07
RNF135Q8IUD6 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF135Q8IUD6 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF135Q8IUD6 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF135Q8IUD6 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RNF135Q8IUD6 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF135Q8IUD6 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF135Q8IUD6 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.72■■□□□ 1.07
RNF135Q8IUD6 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.72■■□□□ 1.07
RNF135Q8IUD6 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF135Q8IUD6 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF135Q8IUD6 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF135Q8IUD6 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF135Q8IUD6 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms