Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
UBE3BQ7Z3V4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
UBE3BQ7Z3V4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC25.69■■□□□ 1.7
UBE3BQ7Z3V4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC25.69■■□□□ 1.7
UBE3BQ7Z3V4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
UBE3BQ7Z3V4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
UBE3BQ7Z3V4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC25.69■■□□□ 1.7
UBE3BQ7Z3V4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
UBE3BQ7Z3V4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC25.69■■□□□ 1.7
UBE3BQ7Z3V4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
UBE3BQ7Z3V4 MMAB-206ENST00000540016 945 ntTSL 3 BASIC25.69■■□□□ 1.7
UBE3BQ7Z3V4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC25.69■■□□□ 1.7
UBE3BQ7Z3V4 AC060766.5-201ENST00000590539 871 ntBASIC25.69■■□□□ 1.7
UBE3BQ7Z3V4 AC008687.6-201ENST00000596318 630 ntBASIC25.69■■□□□ 1.7
UBE3BQ7Z3V4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
UBE3BQ7Z3V4 HLA-B-256ENST00000639848 1089 ntBASIC25.69■■□□□ 1.7
UBE3BQ7Z3V4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC25.69■■□□□ 1.7
UBE3BQ7Z3V4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC25.69■■□□□ 1.7
UBE3BQ7Z3V4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
UBE3BQ7Z3V4 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
UBE3BQ7Z3V4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC25.68■■□□□ 1.7
UBE3BQ7Z3V4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
UBE3BQ7Z3V4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
UBE3BQ7Z3V4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC25.68■■□□□ 1.7
UBE3BQ7Z3V4 PRORSD1P-201ENST00000295112 541 ntBASIC25.68■■□□□ 1.7
UBE3BQ7Z3V4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC25.68■■□□□ 1.7
UBE3BQ7Z3V4 KRT18P29-201ENST00000397031 1267 ntBASIC25.68■■□□□ 1.7
UBE3BQ7Z3V4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC25.68■■□□□ 1.7
UBE3BQ7Z3V4 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC25.68■■□□□ 1.7
UBE3BQ7Z3V4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC25.68■■□□□ 1.7
UBE3BQ7Z3V4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
UBE3BQ7Z3V4 AL049796.1-201ENST00000565336 1766 ntBASIC25.68■■□□□ 1.7
UBE3BQ7Z3V4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
UBE3BQ7Z3V4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
UBE3BQ7Z3V4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC25.67■■□□□ 1.7
UBE3BQ7Z3V4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC25.67■■□□□ 1.7
UBE3BQ7Z3V4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
UBE3BQ7Z3V4 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
UBE3BQ7Z3V4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC25.67■■□□□ 1.7
UBE3BQ7Z3V4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
UBE3BQ7Z3V4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
UBE3BQ7Z3V4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC25.67■■□□□ 1.7
UBE3BQ7Z3V4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
UBE3BQ7Z3V4 FEM1AP4-201ENST00000443167 1987 ntBASIC25.67■■□□□ 1.7
UBE3BQ7Z3V4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
UBE3BQ7Z3V4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
UBE3BQ7Z3V4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC25.66■■□□□ 1.7
UBE3BQ7Z3V4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC25.66■■□□□ 1.7
UBE3BQ7Z3V4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
UBE3BQ7Z3V4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC25.66■■□□□ 1.7
UBE3BQ7Z3V4 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC25.66■■□□□ 1.7
UBE3BQ7Z3V4 HES2-205ENST00000487437 968 ntTSL 3 BASIC25.66■■□□□ 1.7
UBE3BQ7Z3V4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
UBE3BQ7Z3V4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
UBE3BQ7Z3V4 AF106564.1-201ENST00000607058 2553 ntBASIC25.66■■□□□ 1.7
UBE3BQ7Z3V4 WWC2-AS2-201ENST00000578387 2183 ntBASIC25.66■■□□□ 1.7
UBE3BQ7Z3V4 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC25.66■■□□□ 1.7
UBE3BQ7Z3V4 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
UBE3BQ7Z3V4 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
UBE3BQ7Z3V4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
UBE3BQ7Z3V4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
UBE3BQ7Z3V4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
UBE3BQ7Z3V4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
UBE3BQ7Z3V4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
UBE3BQ7Z3V4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
UBE3BQ7Z3V4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC25.65■■□□□ 1.7
UBE3BQ7Z3V4 AC026366.1-201ENST00000488803 879 ntBASIC25.65■■□□□ 1.7
UBE3BQ7Z3V4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
UBE3BQ7Z3V4 AP003097.1-201ENST00000530657 1135 ntBASIC25.65■■□□□ 1.7
UBE3BQ7Z3V4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
UBE3BQ7Z3V4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC25.65■■□□□ 1.7
UBE3BQ7Z3V4 AC006058.3-201ENST00000606217 1069 ntBASIC25.65■■□□□ 1.7
UBE3BQ7Z3V4 AL356652.1-201ENST00000615962 565 ntBASIC25.65■■□□□ 1.7
UBE3BQ7Z3V4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
UBE3BQ7Z3V4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
UBE3BQ7Z3V4 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
UBE3BQ7Z3V4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
UBE3BQ7Z3V4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
UBE3BQ7Z3V4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
UBE3BQ7Z3V4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
UBE3BQ7Z3V4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
UBE3BQ7Z3V4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
UBE3BQ7Z3V4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.7
UBE3BQ7Z3V4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
UBE3BQ7Z3V4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC25.64■■□□□ 1.7
UBE3BQ7Z3V4 PNMA6B-201ENST00000538162 1200 ntBASIC25.64■■□□□ 1.7
UBE3BQ7Z3V4 C2orf69P4-201ENST00000565394 541 ntBASIC25.64■■□□□ 1.7
UBE3BQ7Z3V4 AC092368.3-202ENST00000574180 1591 ntBASIC25.64■■□□□ 1.69
UBE3BQ7Z3V4 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
UBE3BQ7Z3V4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
UBE3BQ7Z3V4 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
UBE3BQ7Z3V4 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
UBE3BQ7Z3V4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
UBE3BQ7Z3V4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
UBE3BQ7Z3V4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC25.63■■□□□ 1.69
UBE3BQ7Z3V4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC25.63■■□□□ 1.69
UBE3BQ7Z3V4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
UBE3BQ7Z3V4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
UBE3BQ7Z3V4 AC008403.3-201ENST00000598924 454 ntBASIC25.63■■□□□ 1.69
UBE3BQ7Z3V4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms