Protein–RNA interactions for Protein: Q6ZUF6

LINC00336, Putative uncharacterized protein encoded by LINC00336, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00336Q6ZUF6 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00336Q6ZUF6 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00336Q6ZUF6 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC13.77□□□□□ -0.21
LINC00336Q6ZUF6 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
LINC00336Q6ZUF6 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00336Q6ZUF6 GCK-205ENST00000437084 1385 ntTSL 5 BASIC13.77□□□□□ -0.21
LINC00336Q6ZUF6 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC00336Q6ZUF6 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00336Q6ZUF6 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC13.77□□□□□ -0.21
LINC00336Q6ZUF6 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC13.77□□□□□ -0.21
LINC00336Q6ZUF6 CD177P1-201ENST00000606252 935 ntBASIC13.77□□□□□ -0.21
LINC00336Q6ZUF6 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC13.77□□□□□ -0.21
LINC00336Q6ZUF6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
LINC00336Q6ZUF6 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
LINC00336Q6ZUF6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
LINC00336Q6ZUF6 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00336Q6ZUF6 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC00336Q6ZUF6 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LINC00336Q6ZUF6 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC13.76□□□□□ -0.21
LINC00336Q6ZUF6 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC13.76□□□□□ -0.21
LINC00336Q6ZUF6 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC13.76□□□□□ -0.21
LINC00336Q6ZUF6 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00336Q6ZUF6 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00336Q6ZUF6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00336Q6ZUF6 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00336Q6ZUF6 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00336Q6ZUF6 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC00336Q6ZUF6 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00336Q6ZUF6 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00336Q6ZUF6 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00336Q6ZUF6 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC00336Q6ZUF6 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC13.76□□□□□ -0.21
LINC00336Q6ZUF6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00336Q6ZUF6 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00336Q6ZUF6 LY6E-205ENST00000519611 635 ntTSL 3 BASIC13.76□□□□□ -0.21
LINC00336Q6ZUF6 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
LINC00336Q6ZUF6 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LINC00336Q6ZUF6 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00336Q6ZUF6 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
LINC00336Q6ZUF6 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00336Q6ZUF6 NT5C-211ENST00000582170 653 ntTSL 3 BASIC13.76□□□□□ -0.21
LINC00336Q6ZUF6 AC110285.5-201ENST00000611501 352 ntBASIC13.76□□□□□ -0.21
LINC00336Q6ZUF6 AL590326.2-201ENST00000625139 305 ntBASIC13.76□□□□□ -0.21
LINC00336Q6ZUF6 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC13.76□□□□□ -0.21
LINC00336Q6ZUF6 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC00336Q6ZUF6 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00336Q6ZUF6 LINC01124-201ENST00000409786 2117 ntBASIC13.76□□□□□ -0.21
LINC00336Q6ZUF6 AC004812.2-201ENST00000611079 2094 ntBASIC13.76□□□□□ -0.21
LINC00336Q6ZUF6 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC00336Q6ZUF6 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC00336Q6ZUF6 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00336Q6ZUF6 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00336Q6ZUF6 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00336Q6ZUF6 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
LINC00336Q6ZUF6 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00336Q6ZUF6 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00336Q6ZUF6 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00336Q6ZUF6 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00336Q6ZUF6 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00336Q6ZUF6 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00336Q6ZUF6 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00336Q6ZUF6 RCN1P1-201ENST00000400413 996 ntBASIC13.75□□□□□ -0.21
LINC00336Q6ZUF6 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00336Q6ZUF6 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LINC00336Q6ZUF6 TMPOP1-202ENST00000424642 1267 ntBASIC13.75□□□□□ -0.21
LINC00336Q6ZUF6 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.75□□□□□ -0.21
LINC00336Q6ZUF6 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC13.75□□□□□ -0.21
LINC00336Q6ZUF6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00336Q6ZUF6 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00336Q6ZUF6 RARRES2P10-201ENST00000564312 460 ntBASIC13.75□□□□□ -0.21
LINC00336Q6ZUF6 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC13.75□□□□□ -0.21
LINC00336Q6ZUF6 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC00336Q6ZUF6 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC13.75□□□□□ -0.21
LINC00336Q6ZUF6 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LINC00336Q6ZUF6 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00336Q6ZUF6 MTDHP1-201ENST00000605323 784 ntBASIC13.75□□□□□ -0.21
LINC00336Q6ZUF6 AC012306.2-201ENST00000609350 630 ntBASIC13.75□□□□□ -0.21
LINC00336Q6ZUF6 AC124016.1-201ENST00000609552 612 ntBASIC13.75□□□□□ -0.21
LINC00336Q6ZUF6 SNX21-213ENST00000614929 587 ntTSL 5 BASIC13.75□□□□□ -0.21
LINC00336Q6ZUF6 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00336Q6ZUF6 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00336Q6ZUF6 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00336Q6ZUF6 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00336Q6ZUF6 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00336Q6ZUF6 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00336Q6ZUF6 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00336Q6ZUF6 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00336Q6ZUF6 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LINC00336Q6ZUF6 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00336Q6ZUF6 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00336Q6ZUF6 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00336Q6ZUF6 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00336Q6ZUF6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC13.74□□□□□ -0.21
LINC00336Q6ZUF6 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00336Q6ZUF6 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00336Q6ZUF6 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC00336Q6ZUF6 AC092068.2-201ENST00000590491 1708 ntBASIC13.74□□□□□ -0.21
LINC00336Q6ZUF6 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00336Q6ZUF6 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00336Q6ZUF6 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms