Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 AL031963.3-201ENST00000606441 850 ntBASIC21.35■■□□□ 1.01
PTCRAQ6ISU1 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PTCRAQ6ISU1 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.35■■□□□ 1.01
PTCRAQ6ISU1 AC073508.3-201ENST00000619697 1419 ntBASIC21.35■■□□□ 1.01
PTCRAQ6ISU1 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PTCRAQ6ISU1 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.34■■□□□ 1.01
PTCRAQ6ISU1 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PTCRAQ6ISU1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
PTCRAQ6ISU1 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PTCRAQ6ISU1 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PTCRAQ6ISU1 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
PTCRAQ6ISU1 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PTCRAQ6ISU1 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.34■■□□□ 1.01
PTCRAQ6ISU1 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC21.34■■□□□ 1.01
PTCRAQ6ISU1 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PTCRAQ6ISU1 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.34■■□□□ 1.01
PTCRAQ6ISU1 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PTCRAQ6ISU1 NAPSB-206ENST00000562112 1266 ntBASIC21.34■■□□□ 1.01
PTCRAQ6ISU1 AC073195.1-201ENST00000607241 877 ntBASIC21.34■■□□□ 1.01
PTCRAQ6ISU1 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PTCRAQ6ISU1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PTCRAQ6ISU1 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PTCRAQ6ISU1 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
PTCRAQ6ISU1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PTCRAQ6ISU1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
PTCRAQ6ISU1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.33■■□□□ 1.01
PTCRAQ6ISU1 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.33■■□□□ 1.01
PTCRAQ6ISU1 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PTCRAQ6ISU1 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PTCRAQ6ISU1 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
PTCRAQ6ISU1 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PTCRAQ6ISU1 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PTCRAQ6ISU1 AC104076.2-201ENST00000448912 469 ntBASIC21.33■■□□□ 1.01
PTCRAQ6ISU1 NUDT16P1-203ENST00000513809 620 ntBASIC21.33■■□□□ 1.01
PTCRAQ6ISU1 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
PTCRAQ6ISU1 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.33■■□□□ 1.01
PTCRAQ6ISU1 REXO1L10P-201ENST00000615707 1290 ntBASIC21.33■■□□□ 1.01
PTCRAQ6ISU1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PTCRAQ6ISU1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.33■■□□□ 1
PTCRAQ6ISU1 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
PTCRAQ6ISU1 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.33■■□□□ 1
PTCRAQ6ISU1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
PTCRAQ6ISU1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PTCRAQ6ISU1 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PTCRAQ6ISU1 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PTCRAQ6ISU1 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
PTCRAQ6ISU1 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.32■■□□□ 1
PTCRAQ6ISU1 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.32■■□□□ 1
PTCRAQ6ISU1 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.32■■□□□ 1
PTCRAQ6ISU1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.32■■□□□ 1
PTCRAQ6ISU1 AC116050.2-201ENST00000612102 1779 ntBASIC21.32■■□□□ 1
PTCRAQ6ISU1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PTCRAQ6ISU1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.32■■□□□ 1
PTCRAQ6ISU1 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.32■■□□□ 1
PTCRAQ6ISU1 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.32■■□□□ 1
PTCRAQ6ISU1 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
PTCRAQ6ISU1 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.31■■□□□ 1
PTCRAQ6ISU1 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PTCRAQ6ISU1 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.31■■□□□ 1
PTCRAQ6ISU1 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC21.31■■□□□ 1
PTCRAQ6ISU1 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PTCRAQ6ISU1 SLC25A3P1-201ENST00000443844 931 ntBASIC21.31■■□□□ 1
PTCRAQ6ISU1 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.31■■□□□ 1
PTCRAQ6ISU1 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC21.31■■□□□ 1
PTCRAQ6ISU1 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.31■■□□□ 1
PTCRAQ6ISU1 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.31■■□□□ 1
PTCRAQ6ISU1 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PTCRAQ6ISU1 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
PTCRAQ6ISU1 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
PTCRAQ6ISU1 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.31■■□□□ 1
PTCRAQ6ISU1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.31■■□□□ 1
PTCRAQ6ISU1 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
PTCRAQ6ISU1 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PTCRAQ6ISU1 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.31■■□□□ 1
PTCRAQ6ISU1 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
PTCRAQ6ISU1 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PTCRAQ6ISU1 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PTCRAQ6ISU1 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PTCRAQ6ISU1 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC21.3■■□□□ 1
PTCRAQ6ISU1 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.3■■□□□ 1
PTCRAQ6ISU1 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.3■■□□□ 1
PTCRAQ6ISU1 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.3■■□□□ 1
PTCRAQ6ISU1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PTCRAQ6ISU1 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.3■■□□□ 1
PTCRAQ6ISU1 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC21.3■■□□□ 1
PTCRAQ6ISU1 CYP2D8P-201ENST00000433633 1490 ntBASIC21.3■■□□□ 1
PTCRAQ6ISU1 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
PTCRAQ6ISU1 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.3■■□□□ 1
PTCRAQ6ISU1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PTCRAQ6ISU1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PTCRAQ6ISU1 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PTCRAQ6ISU1 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.29■■□□□ 1
PTCRAQ6ISU1 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.29■■□□□ 1
PTCRAQ6ISU1 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.29■■□□□ 1
PTCRAQ6ISU1 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.29■■□□□ 1
PTCRAQ6ISU1 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
PTCRAQ6ISU1 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.29■■□□□ 1
PTCRAQ6ISU1 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PTCRAQ6ISU1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTCRAQ6ISU1 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms