Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DQA1Q5Y7H0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.13■□□□□ 0.65
HLA-DQA1Q5Y7H0 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DQA1Q5Y7H0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DQA1Q5Y7H0 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.12■□□□□ 0.65
HLA-DQA1Q5Y7H0 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DQA1Q5Y7H0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
HLA-DQA1Q5Y7H0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DQA1Q5Y7H0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DQA1Q5Y7H0 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DQA1Q5Y7H0 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DQA1Q5Y7H0 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
HLA-DQA1Q5Y7H0 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DQA1Q5Y7H0 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.12■□□□□ 0.65
HLA-DQA1Q5Y7H0 FAM21FP-204ENST00000608637 956 ntBASIC19.12■□□□□ 0.65
HLA-DQA1Q5Y7H0 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.12■□□□□ 0.65
HLA-DQA1Q5Y7H0 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DQA1Q5Y7H0 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DQA1Q5Y7H0 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DQA1Q5Y7H0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.12■□□□□ 0.65
HLA-DQA1Q5Y7H0 AC011484.1-201ENST00000377652 1995 ntBASIC19.12■□□□□ 0.65
HLA-DQA1Q5Y7H0 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DQA1Q5Y7H0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DQA1Q5Y7H0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.11■□□□□ 0.65
HLA-DQA1Q5Y7H0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.11■□□□□ 0.65
HLA-DQA1Q5Y7H0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DQA1Q5Y7H0 AC005229.4-201ENST00000610085 2198 ntBASIC19.11■□□□□ 0.65
HLA-DQA1Q5Y7H0 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DQA1Q5Y7H0 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.11■□□□□ 0.65
HLA-DQA1Q5Y7H0 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.11■□□□□ 0.65
HLA-DQA1Q5Y7H0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.11■□□□□ 0.65
HLA-DQA1Q5Y7H0 RAP2CP1-201ENST00000605103 478 ntBASIC19.11■□□□□ 0.65
HLA-DQA1Q5Y7H0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DQA1Q5Y7H0 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DQA1Q5Y7H0 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
HLA-DQA1Q5Y7H0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
HLA-DQA1Q5Y7H0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DQA1Q5Y7H0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DQA1Q5Y7H0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.1■□□□□ 0.65
HLA-DQA1Q5Y7H0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
HLA-DQA1Q5Y7H0 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
HLA-DQA1Q5Y7H0 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DQA1Q5Y7H0 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
HLA-DQA1Q5Y7H0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DQA1Q5Y7H0 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DQA1Q5Y7H0 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DQA1Q5Y7H0 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
HLA-DQA1Q5Y7H0 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DQA1Q5Y7H0 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.1■□□□□ 0.65
HLA-DQA1Q5Y7H0 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.1■□□□□ 0.65
HLA-DQA1Q5Y7H0 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.1■□□□□ 0.65
HLA-DQA1Q5Y7H0 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DQA1Q5Y7H0 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
HLA-DQA1Q5Y7H0 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DQA1Q5Y7H0 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.1■□□□□ 0.65
HLA-DQA1Q5Y7H0 OR10C1-204ENST00000622521 1039 ntBASIC19.1■□□□□ 0.65
HLA-DQA1Q5Y7H0 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
HLA-DQA1Q5Y7H0 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DQA1Q5Y7H0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DQA1Q5Y7H0 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
HLA-DQA1Q5Y7H0 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
HLA-DQA1Q5Y7H0 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.09■□□□□ 0.65
HLA-DQA1Q5Y7H0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DQA1Q5Y7H0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DQA1Q5Y7H0 CROCCP5-201ENST00000436658 830 ntBASIC19.09■□□□□ 0.65
HLA-DQA1Q5Y7H0 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DQA1Q5Y7H0 RARRES2P4-201ENST00000514074 484 ntBASIC19.09■□□□□ 0.65
HLA-DQA1Q5Y7H0 AC016405.3-201ENST00000607710 860 ntBASIC19.09■□□□□ 0.65
HLA-DQA1Q5Y7H0 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DQA1Q5Y7H0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
HLA-DQA1Q5Y7H0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DQA1Q5Y7H0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DQA1Q5Y7H0 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
HLA-DQA1Q5Y7H0 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HLA-DQA1Q5Y7H0 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
HLA-DQA1Q5Y7H0 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HLA-DQA1Q5Y7H0 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.08■□□□□ 0.65
HLA-DQA1Q5Y7H0 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HLA-DQA1Q5Y7H0 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.08■□□□□ 0.65
HLA-DQA1Q5Y7H0 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.08■□□□□ 0.64
HLA-DQA1Q5Y7H0 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.08■□□□□ 0.64
HLA-DQA1Q5Y7H0 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.08■□□□□ 0.64
HLA-DQA1Q5Y7H0 AF201337.1-201ENST00000520239 748 ntBASIC19.08■□□□□ 0.64
HLA-DQA1Q5Y7H0 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.08■□□□□ 0.64
HLA-DQA1Q5Y7H0 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
HLA-DQA1Q5Y7H0 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DQA1Q5Y7H0 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.08■□□□□ 0.64
HLA-DQA1Q5Y7H0 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DQA1Q5Y7H0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DQA1Q5Y7H0 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DQA1Q5Y7H0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DQA1Q5Y7H0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DQA1Q5Y7H0 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
HLA-DQA1Q5Y7H0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DQA1Q5Y7H0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
HLA-DQA1Q5Y7H0 AC138932.1-201ENST00000534164 6830 ntBASIC19.07■□□□□ 0.64
HLA-DQA1Q5Y7H0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
HLA-DQA1Q5Y7H0 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DQA1Q5Y7H0 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DQA1Q5Y7H0 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms