Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.63■■□□□ 1.05
PTPN20Q4JDL3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PTPN20Q4JDL3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
PTPN20Q4JDL3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.63■■□□□ 1.05
PTPN20Q4JDL3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
PTPN20Q4JDL3 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PTPN20Q4JDL3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.63■■□□□ 1.05
PTPN20Q4JDL3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PTPN20Q4JDL3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.62■■□□□ 1.05
PTPN20Q4JDL3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.62■■□□□ 1.05
PTPN20Q4JDL3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PTPN20Q4JDL3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PTPN20Q4JDL3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PTPN20Q4JDL3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PTPN20Q4JDL3 AC007322.1-201ENST00000426983 750 ntBASIC21.62■■□□□ 1.05
PTPN20Q4JDL3 CYP2T1P-201ENST00000432607 1285 ntBASIC21.62■■□□□ 1.05
PTPN20Q4JDL3 CDCA4P2-201ENST00000441182 718 ntBASIC21.62■■□□□ 1.05
PTPN20Q4JDL3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.62■■□□□ 1.05
PTPN20Q4JDL3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.62■■□□□ 1.05
PTPN20Q4JDL3 MIR2861-201ENST00000636310 90 ntBASIC21.62■■□□□ 1.05
PTPN20Q4JDL3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
PTPN20Q4JDL3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
PTPN20Q4JDL3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
PTPN20Q4JDL3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
PTPN20Q4JDL3 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
PTPN20Q4JDL3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PTPN20Q4JDL3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.61■■□□□ 1.05
PTPN20Q4JDL3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
PTPN20Q4JDL3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PTPN20Q4JDL3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PTPN20Q4JDL3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PTPN20Q4JDL3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PTPN20Q4JDL3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.61■■□□□ 1.05
PTPN20Q4JDL3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.61■■□□□ 1.05
PTPN20Q4JDL3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PTPN20Q4JDL3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.61■■□□□ 1.05
PTPN20Q4JDL3 RAP2CP1-201ENST00000605103 478 ntBASIC21.61■■□□□ 1.05
PTPN20Q4JDL3 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.61■■□□□ 1.05
PTPN20Q4JDL3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
PTPN20Q4JDL3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.61■■□□□ 1.05
PTPN20Q4JDL3 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PTPN20Q4JDL3 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PTPN20Q4JDL3 AP005212.1-201ENST00000581547 1997 ntBASIC21.61■■□□□ 1.05
PTPN20Q4JDL3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PTPN20Q4JDL3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.61■■□□□ 1.05
PTPN20Q4JDL3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PTPN20Q4JDL3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.61■■□□□ 1.05
PTPN20Q4JDL3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
PTPN20Q4JDL3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.6■■□□□ 1.05
PTPN20Q4JDL3 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.6■■□□□ 1.05
PTPN20Q4JDL3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PTPN20Q4JDL3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.6■■□□□ 1.05
PTPN20Q4JDL3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PTPN20Q4JDL3 LINC01006-201ENST00000333319 2292 ntBASIC21.6■■□□□ 1.05
PTPN20Q4JDL3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.6■■□□□ 1.05
PTPN20Q4JDL3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.6■■□□□ 1.05
PTPN20Q4JDL3 AC092667.1-201ENST00000434301 2586 ntBASIC21.6■■□□□ 1.05
PTPN20Q4JDL3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
PTPN20Q4JDL3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PTPN20Q4JDL3 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PTPN20Q4JDL3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
PTPN20Q4JDL3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PTPN20Q4JDL3 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
PTPN20Q4JDL3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.59■■□□□ 1.05
PTPN20Q4JDL3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PTPN20Q4JDL3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.59■■□□□ 1.05
PTPN20Q4JDL3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.59■■□□□ 1.05
PTPN20Q4JDL3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
PTPN20Q4JDL3 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
PTPN20Q4JDL3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PTPN20Q4JDL3 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.59■■□□□ 1.05
PTPN20Q4JDL3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
PTPN20Q4JDL3 RARRES2P4-201ENST00000514074 484 ntBASIC21.59■■□□□ 1.05
PTPN20Q4JDL3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
PTPN20Q4JDL3 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.59■■□□□ 1.05
PTPN20Q4JDL3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PTPN20Q4JDL3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PTPN20Q4JDL3 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PTPN20Q4JDL3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PTPN20Q4JDL3 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PTPN20Q4JDL3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PTPN20Q4JDL3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
PTPN20Q4JDL3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
PTPN20Q4JDL3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
PTPN20Q4JDL3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.58■■□□□ 1.05
PTPN20Q4JDL3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PTPN20Q4JDL3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
PTPN20Q4JDL3 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.58■■□□□ 1.05
PTPN20Q4JDL3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.58■■□□□ 1.05
PTPN20Q4JDL3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PTPN20Q4JDL3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PTPN20Q4JDL3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PTPN20Q4JDL3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.58■■□□□ 1.05
PTPN20Q4JDL3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.58■■□□□ 1.05
PTPN20Q4JDL3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.58■■□□□ 1.05
PTPN20Q4JDL3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.58■■□□□ 1.05
PTPN20Q4JDL3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
PTPN20Q4JDL3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
PTPN20Q4JDL3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
PTPN20Q4JDL3 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms