Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
PEX3P56589 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
PEX3P56589 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC22.63■■□□□ 1.21
PEX3P56589 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC22.63■■□□□ 1.21
PEX3P56589 BX276092.2-201ENST00000417668 665 ntBASIC22.63■■□□□ 1.21
PEX3P56589 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC22.63■■□□□ 1.21
PEX3P56589 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC22.63■■□□□ 1.21
PEX3P56589 AL138781.1-201ENST00000566567 1274 ntBASIC22.63■■□□□ 1.21
PEX3P56589 PFKL-212ENST00000628044 129 ntTSL 3 BASIC22.63■■□□□ 1.21
PEX3P56589 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC22.63■■□□□ 1.21
PEX3P56589 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
PEX3P56589 AC027702.1-201ENST00000563810 1770 ntBASIC22.63■■□□□ 1.21
PEX3P56589 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PEX3P56589 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PEX3P56589 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PEX3P56589 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PEX3P56589 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC22.62■■□□□ 1.21
PEX3P56589 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC22.62■■□□□ 1.21
PEX3P56589 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC22.62■■□□□ 1.21
PEX3P56589 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
PEX3P56589 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC22.62■■□□□ 1.21
PEX3P56589 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC22.62■■□□□ 1.21
PEX3P56589 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PEX3P56589 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC22.62■■□□□ 1.21
PEX3P56589 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC22.62■■□□□ 1.21
PEX3P56589 CYP2T3P-201ENST00000601990 817 ntBASIC22.62■■□□□ 1.21
PEX3P56589 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC22.62■■□□□ 1.21
PEX3P56589 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC22.62■■□□□ 1.21
PEX3P56589 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
PEX3P56589 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PEX3P56589 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PEX3P56589 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PEX3P56589 AC006128.1-201ENST00000624704 1661 ntBASIC22.62■■□□□ 1.21
PEX3P56589 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PEX3P56589 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC22.61■■□□□ 1.21
PEX3P56589 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PEX3P56589 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC22.61■■□□□ 1.21
PEX3P56589 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
PEX3P56589 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PEX3P56589 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC22.61■■□□□ 1.21
PEX3P56589 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC22.61■■□□□ 1.21
PEX3P56589 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PEX3P56589 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC22.61■■□□□ 1.21
PEX3P56589 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PEX3P56589 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
PEX3P56589 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.61■■□□□ 1.21
PEX3P56589 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC22.61■■□□□ 1.21
PEX3P56589 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC22.61■■□□□ 1.21
PEX3P56589 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
PEX3P56589 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
PEX3P56589 KRT17P1-201ENST00000399211 1546 ntBASIC22.61■■□□□ 1.21
PEX3P56589 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
PEX3P56589 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
PEX3P56589 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
PEX3P56589 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
PEX3P56589 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PEX3P56589 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PEX3P56589 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC22.6■■□□□ 1.21
PEX3P56589 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC22.6■■□□□ 1.21
PEX3P56589 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC22.6■■□□□ 1.21
PEX3P56589 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PEX3P56589 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PEX3P56589 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC22.6■■□□□ 1.21
PEX3P56589 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC22.6■■□□□ 1.21
PEX3P56589 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC22.6■■□□□ 1.21
PEX3P56589 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PEX3P56589 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PEX3P56589 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PEX3P56589 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC22.6■■□□□ 1.21
PEX3P56589 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PEX3P56589 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
PEX3P56589 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PEX3P56589 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PEX3P56589 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC22.59■■□□□ 1.21
PEX3P56589 KRT18P68-201ENST00000392293 1000 ntBASIC22.59■■□□□ 1.21
PEX3P56589 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC22.59■■□□□ 1.21
PEX3P56589 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC22.59■■□□□ 1.21
PEX3P56589 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PEX3P56589 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC22.59■■□□□ 1.21
PEX3P56589 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC22.59■■□□□ 1.21
PEX3P56589 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
PEX3P56589 GCK-205ENST00000437084 1385 ntTSL 5 BASIC22.59■■□□□ 1.21
PEX3P56589 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
PEX3P56589 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PEX3P56589 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
PEX3P56589 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
PEX3P56589 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PEX3P56589 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
PEX3P56589 EMC9-206ENST00000560403 872 ntTSL 2 BASIC22.58■■□□□ 1.21
PEX3P56589 AC098934.4-201ENST00000564127 592 ntBASIC22.58■■□□□ 1.21
PEX3P56589 AC142086.2-201ENST00000569753 217 ntBASIC22.58■■□□□ 1.21
PEX3P56589 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC22.58■■□□□ 1.21
PEX3P56589 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC22.58■■□□□ 1.21
PEX3P56589 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC22.58■■□□□ 1.21
PEX3P56589 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PEX3P56589 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
PEX3P56589 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC22.58■■□□□ 1.21
PEX3P56589 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.58■■□□□ 1.21
PEX3P56589 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PEX3P56589 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC22.58■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms