Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.5■■□□□ 1.03
EPHB3P54753 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.5■■□□□ 1.03
EPHB3P54753 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.5■■□□□ 1.03
EPHB3P54753 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.5■■□□□ 1.03
EPHB3P54753 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.5■■□□□ 1.03
EPHB3P54753 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.5■■□□□ 1.03
EPHB3P54753 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.5■■□□□ 1.03
EPHB3P54753 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.5■■□□□ 1.03
EPHB3P54753 AL356652.1-201ENST00000615962 565 ntBASIC21.5■■□□□ 1.03
EPHB3P54753 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.5■■□□□ 1.03
EPHB3P54753 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
EPHB3P54753 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
EPHB3P54753 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
EPHB3P54753 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
EPHB3P54753 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.5■■□□□ 1.03
EPHB3P54753 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
EPHB3P54753 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
EPHB3P54753 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
EPHB3P54753 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
EPHB3P54753 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.49■■□□□ 1.03
EPHB3P54753 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
EPHB3P54753 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
EPHB3P54753 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
EPHB3P54753 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
EPHB3P54753 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
EPHB3P54753 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.49■■□□□ 1.03
EPHB3P54753 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
EPHB3P54753 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
EPHB3P54753 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
EPHB3P54753 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
EPHB3P54753 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
EPHB3P54753 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
EPHB3P54753 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.48■■□□□ 1.03
EPHB3P54753 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
EPHB3P54753 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.48■■□□□ 1.03
EPHB3P54753 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
EPHB3P54753 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.48■■□□□ 1.03
EPHB3P54753 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
EPHB3P54753 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
EPHB3P54753 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.48■■□□□ 1.03
EPHB3P54753 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
EPHB3P54753 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.48■■□□□ 1.03
EPHB3P54753 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
EPHB3P54753 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
EPHB3P54753 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
EPHB3P54753 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.47■■□□□ 1.03
EPHB3P54753 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
EPHB3P54753 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
EPHB3P54753 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.47■■□□□ 1.03
EPHB3P54753 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
EPHB3P54753 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.47■■□□□ 1.03
EPHB3P54753 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
EPHB3P54753 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
EPHB3P54753 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.47■■□□□ 1.03
EPHB3P54753 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.47■■□□□ 1.03
EPHB3P54753 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.47■■□□□ 1.03
EPHB3P54753 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.46■■□□□ 1.03
EPHB3P54753 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
EPHB3P54753 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.46■■□□□ 1.03
EPHB3P54753 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
EPHB3P54753 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
EPHB3P54753 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
EPHB3P54753 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
EPHB3P54753 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.46■■□□□ 1.03
EPHB3P54753 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.46■■□□□ 1.03
EPHB3P54753 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.46■■□□□ 1.03
EPHB3P54753 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.46■■□□□ 1.03
EPHB3P54753 AL359736.2-201ENST00000621992 437 ntBASIC21.46■■□□□ 1.03
EPHB3P54753 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.46■■□□□ 1.03
EPHB3P54753 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
EPHB3P54753 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
EPHB3P54753 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
EPHB3P54753 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.45■■□□□ 1.03
EPHB3P54753 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
EPHB3P54753 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
EPHB3P54753 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.45■■□□□ 1.03
EPHB3P54753 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.45■■□□□ 1.03
EPHB3P54753 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.45■■□□□ 1.02
EPHB3P54753 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
EPHB3P54753 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
EPHB3P54753 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
EPHB3P54753 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
EPHB3P54753 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
EPHB3P54753 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.45■■□□□ 1.02
EPHB3P54753 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
EPHB3P54753 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
EPHB3P54753 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.45■■□□□ 1.02
EPHB3P54753 UBE2SP1-201ENST00000450587 669 ntBASIC21.45■■□□□ 1.02
EPHB3P54753 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
EPHB3P54753 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
EPHB3P54753 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.45■■□□□ 1.02
EPHB3P54753 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
EPHB3P54753 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
EPHB3P54753 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
EPHB3P54753 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
EPHB3P54753 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
EPHB3P54753 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.45■■□□□ 1.02
EPHB3P54753 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
EPHB3P54753 AC011484.1-201ENST00000377652 1995 ntBASIC21.45■■□□□ 1.02
EPHB3P54753 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms