Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SSR1P43307 CCDC92B-201ENST00000575506 885 ntBASIC21.71■■□□□ 1.07
SSR1P43307 TERF1P2-201ENST00000583350 1212 ntBASIC21.71■■□□□ 1.07
SSR1P43307 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SSR1P43307 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SSR1P43307 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
SSR1P43307 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SSR1P43307 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SSR1P43307 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
SSR1P43307 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SSR1P43307 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SSR1P43307 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.7■■□□□ 1.06
SSR1P43307 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SSR1P43307 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SSR1P43307 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.7■■□□□ 1.06
SSR1P43307 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.7■■□□□ 1.06
SSR1P43307 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.7■■□□□ 1.06
SSR1P43307 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SSR1P43307 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SSR1P43307 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SSR1P43307 LINC01521-201ENST00000504184 1943 ntBASIC21.7■■□□□ 1.06
SSR1P43307 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SSR1P43307 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SSR1P43307 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.69■■□□□ 1.06
SSR1P43307 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
SSR1P43307 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SSR1P43307 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SSR1P43307 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SSR1P43307 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.69■■□□□ 1.06
SSR1P43307 AC010141.2-201ENST00000452426 721 ntBASIC21.69■■□□□ 1.06
SSR1P43307 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.69■■□□□ 1.06
SSR1P43307 KRT18P14-201ENST00000534205 1250 ntBASIC21.69■■□□□ 1.06
SSR1P43307 DUX4L2-201ENST00000561772 1275 ntBASIC21.69■■□□□ 1.06
SSR1P43307 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SSR1P43307 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.69■■□□□ 1.06
SSR1P43307 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.69■■□□□ 1.06
SSR1P43307 DUX4L6-201ENST00000626483 1275 ntBASIC21.69■■□□□ 1.06
SSR1P43307 DUX4L1-201ENST00000627662 1275 ntBASIC21.69■■□□□ 1.06
SSR1P43307 DUX4L8-201ENST00000629013 1275 ntBASIC21.69■■□□□ 1.06
SSR1P43307 DUX4L3-201ENST00000630187 1275 ntBASIC21.69■■□□□ 1.06
SSR1P43307 DUX4L7-201ENST00000630678 1275 ntBASIC21.69■■□□□ 1.06
SSR1P43307 DUX4L5-201ENST00000630834 1275 ntBASIC21.69■■□□□ 1.06
SSR1P43307 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
SSR1P43307 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SSR1P43307 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
SSR1P43307 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SSR1P43307 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SSR1P43307 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SSR1P43307 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SSR1P43307 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.69■■□□□ 1.06
SSR1P43307 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.69■■□□□ 1.06
SSR1P43307 FP700111.2-201ENST00000619190 1892 ntBASIC21.69■■□□□ 1.06
SSR1P43307 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SSR1P43307 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.68■■□□□ 1.06
SSR1P43307 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC21.68■■□□□ 1.06
SSR1P43307 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
SSR1P43307 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SSR1P43307 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SSR1P43307 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.68■■□□□ 1.06
SSR1P43307 AP001160.3-201ENST00000601484 763 ntBASIC21.68■■□□□ 1.06
SSR1P43307 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SSR1P43307 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.68■■□□□ 1.06
SSR1P43307 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SSR1P43307 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.68■■□□□ 1.06
SSR1P43307 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SSR1P43307 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
SSR1P43307 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SSR1P43307 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SSR1P43307 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.68■■□□□ 1.06
SSR1P43307 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SSR1P43307 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SSR1P43307 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SSR1P43307 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SSR1P43307 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SSR1P43307 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SSR1P43307 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
SSR1P43307 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SSR1P43307 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SSR1P43307 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SSR1P43307 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.67■■□□□ 1.06
SSR1P43307 AC245052.3-201ENST00000450182 901 ntBASIC21.67■■□□□ 1.06
SSR1P43307 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.67■■□□□ 1.06
SSR1P43307 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.67■■□□□ 1.06
SSR1P43307 SLC7A5P2-201ENST00000553010 536 ntBASIC21.67■■□□□ 1.06
SSR1P43307 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.67■■□□□ 1.06
SSR1P43307 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.67■■□□□ 1.06
SSR1P43307 AL391422.3-201ENST00000603791 2761 ntBASIC21.67■■□□□ 1.06
SSR1P43307 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
SSR1P43307 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SSR1P43307 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SSR1P43307 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SSR1P43307 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SSR1P43307 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
SSR1P43307 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SSR1P43307 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SSR1P43307 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
SSR1P43307 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.66■■□□□ 1.06
SSR1P43307 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.66■■□□□ 1.06
SSR1P43307 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SSR1P43307 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms