Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC26■■□□□ 1.75
RFC4P35249 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC26■■□□□ 1.75
RFC4P35249 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC26■■□□□ 1.75
RFC4P35249 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC26■■□□□ 1.75
RFC4P35249 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RFC4P35249 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC25.99■■□□□ 1.75
RFC4P35249 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC25.99■■□□□ 1.75
RFC4P35249 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RFC4P35249 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
RFC4P35249 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RFC4P35249 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC25.99■■□□□ 1.75
RFC4P35249 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RFC4P35249 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RFC4P35249 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC25.99■■□□□ 1.75
RFC4P35249 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RFC4P35249 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RFC4P35249 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RFC4P35249 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
RFC4P35249 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RFC4P35249 MOK-233ENST00000524214 1539 ntTSL 2 BASIC25.98■■□□□ 1.75
RFC4P35249 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC25.98■■□□□ 1.75
RFC4P35249 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
RFC4P35249 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC25.98■■□□□ 1.75
RFC4P35249 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RFC4P35249 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
RFC4P35249 AC127496.7-201ENST00000625110 1798 ntBASIC25.98■■□□□ 1.75
RFC4P35249 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
RFC4P35249 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC25.98■■□□□ 1.75
RFC4P35249 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC25.98■■□□□ 1.75
RFC4P35249 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC25.98■■□□□ 1.75
RFC4P35249 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
RFC4P35249 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC25.98■■□□□ 1.75
RFC4P35249 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC25.98■■□□□ 1.75
RFC4P35249 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC25.98■■□□□ 1.75
RFC4P35249 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
RFC4P35249 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC25.98■■□□□ 1.75
RFC4P35249 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RFC4P35249 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
RFC4P35249 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
RFC4P35249 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC25.97■■□□□ 1.75
RFC4P35249 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
RFC4P35249 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RFC4P35249 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC25.97■■□□□ 1.75
RFC4P35249 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC25.97■■□□□ 1.75
RFC4P35249 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
RFC4P35249 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
RFC4P35249 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RFC4P35249 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
RFC4P35249 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC25.97■■□□□ 1.75
RFC4P35249 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC25.97■■□□□ 1.75
RFC4P35249 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
RFC4P35249 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
RFC4P35249 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC25.96■■□□□ 1.75
RFC4P35249 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC25.96■■□□□ 1.75
RFC4P35249 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
RFC4P35249 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RFC4P35249 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC25.96■■□□□ 1.75
RFC4P35249 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
RFC4P35249 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
RFC4P35249 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
RFC4P35249 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
RFC4P35249 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
RFC4P35249 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
RFC4P35249 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC25.95■■□□□ 1.75
RFC4P35249 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
RFC4P35249 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC25.95■■□□□ 1.74
RFC4P35249 AL445228.2-201ENST00000605589 952 ntBASIC25.95■■□□□ 1.74
RFC4P35249 AC026471.5-201ENST00000615068 467 ntBASIC25.95■■□□□ 1.74
RFC4P35249 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.74
RFC4P35249 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC25.95■■□□□ 1.74
RFC4P35249 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
RFC4P35249 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.74
RFC4P35249 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RFC4P35249 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
RFC4P35249 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
RFC4P35249 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC25.94■■□□□ 1.74
RFC4P35249 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC25.94■■□□□ 1.74
RFC4P35249 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC25.94■■□□□ 1.74
RFC4P35249 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
RFC4P35249 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RFC4P35249 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC25.94■■□□□ 1.74
RFC4P35249 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC25.94■■□□□ 1.74
RFC4P35249 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RFC4P35249 CD177P1-201ENST00000606252 935 ntBASIC25.94■■□□□ 1.74
RFC4P35249 AL353708.3-201ENST00000610272 989 ntBASIC25.94■■□□□ 1.74
RFC4P35249 AL356652.1-201ENST00000615962 565 ntBASIC25.94■■□□□ 1.74
RFC4P35249 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
RFC4P35249 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RFC4P35249 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RFC4P35249 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC25.94■■□□□ 1.74
RFC4P35249 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
RFC4P35249 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
RFC4P35249 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
RFC4P35249 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
RFC4P35249 TMPOP1-202ENST00000424642 1267 ntBASIC25.93■■□□□ 1.74
RFC4P35249 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC25.93■■□□□ 1.74
RFC4P35249 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
RFC4P35249 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
RFC4P35249 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
RFC4P35249 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC25.92■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms