Protein–RNA interactions for Protein: P23968

VMA16, V-type proton ATPase subunit c'', yeastyeast

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA16P23968 YOR248WYOR248W 303 nt2.54□□□□□ -2
VMA16P23968 REC8YPR007C 2043 nt2.54□□□□□ -2
VMA16P23968 ECM21YBL101C 3354 nt2.53□□□□□ -2
VMA16P23968 YIL169CYIL169C 2988 nt2.53□□□□□ -2
VMA16P23968 PPN1YDR452W 2025 nt2.53□□□□□ -2
VMA16P23968 YBR012W-AYBR012W-A 1323 nt2.53□□□□□ -2
VMA16P23968 YOR142W-AYOR142W-A 1323 nt2.53□□□□□ -2
VMA16P23968 YPR158W-AYPR158W-A 1323 nt2.53□□□□□ -2
VMA16P23968 MTC3YGL226W 372 nt2.53□□□□□ -2
VMA16P23968 YHR125WYHR125W 306 nt2.53□□□□□ -2
VMA16P23968 RPL40AYIL148W 387 nt2.53□□□□□ -2
VMA16P23968 TIM8YJR135W-A 264 nt2.53□□□□□ -2
VMA16P23968 YJR140W-AYJR140W-A 150 nt2.53□□□□□ -2
VMA16P23968 RNP1YLL046C 750 nt2.53□□□□□ -2
VMA16P23968 YLR269CYLR269C 351 nt2.53□□□□□ -2
VMA16P23968 YLR406C-AYLR406C-A 150 nt2.53□□□□□ -2
VMA16P23968 YLR458WYLR458W 381 nt2.53□□□□□ -2
VMA16P23968 YBR197CYBR197C 654 nt2.53□□□□□ -2
VMA16P23968 PMR1YGL167C 2853 nt2.53□□□□□ -2
VMA16P23968 YHR080CYHR080C 4038 nt2.53□□□□□ -2
VMA16P23968 GCD6YDR211W 2139 nt2.53□□□□□ -2.01
VMA16P23968 ROG1YGL144C 2058 nt2.53□□□□□ -2.01
VMA16P23968 YDR114CYDR114C 303 nt2.52□□□□□ -2.01
VMA16P23968 HUR1YGL168W 333 nt2.52□□□□□ -2.01
VMA16P23968 VPH2YKL119C 648 nt2.52□□□□□ -2.01
VMA16P23968 RPL22AYLR061W 366 nt2.52□□□□□ -2.01
VMA16P23968 CMC2YBL059C-A 330 nt2.52□□□□□ -2.01
VMA16P23968 YOR105WYOR105W 327 nt2.52□□□□□ -2.01
VMA16P23968 ATP15YPL271W 189 nt2.52□□□□□ -2.01
VMA16P23968 BRO1YPL084W 2535 nt2.52□□□□□ -2.01
VMA16P23968 CIN8YEL061C 3003 nt2.52□□□□□ -2.01
VMA16P23968 YTA7YGR270W 4140 nt2.52□□□□□ -2.01
VMA16P23968 SUP56tL(CAA)A 82 nt2.51□□□□□ -2.01
VMA16P23968 AAD16YFL057C 459 nt2.51□□□□□ -2.01
VMA16P23968 SUP53tL(CAA)C 82 nt2.51□□□□□ -2.01
VMA16P23968 tL(CAA)DtL(CAA)D 82 nt2.51□□□□□ -2.01
VMA16P23968 tL(CAA)G1tL(CAA)G1 82 nt2.51□□□□□ -2.01
VMA16P23968 SUP54tL(CAA)G2 82 nt2.51□□□□□ -2.01
VMA16P23968 tL(CAA)G3tL(CAA)G3 82 nt2.51□□□□□ -2.01
VMA16P23968 tL(CAA)KtL(CAA)K 82 nt2.51□□□□□ -2.01
VMA16P23968 tL(CAA)LtL(CAA)L 82 nt2.51□□□□□ -2.01
VMA16P23968 tL(CAA)MtL(CAA)M 82 nt2.51□□□□□ -2.01
VMA16P23968 tL(CAA)NtL(CAA)N 82 nt2.51□□□□□ -2.01
VMA16P23968 RPC10YHR143W-A 213 nt2.51□□□□□ -2.01
VMA16P23968 YMR153C-AYMR153C-A 336 nt2.51□□□□□ -2.01
VMA16P23968 SIP18YMR175W 240 nt2.51□□□□□ -2.01
VMA16P23968 RSA1YPL193W 1146 nt2.51□□□□□ -2.01
VMA16P23968 ACM1YPL267W 630 nt2.51□□□□□ -2.01
VMA16P23968 SGM1YJR134C 2124 nt2.51□□□□□ -2.01
VMA16P23968 SEC7YDR170C 6030 nt2.51□□□□□ -2.01
VMA16P23968 PSK2YOL045W 3306 nt2.5□□□□□ -2.01
VMA16P23968 YDR090CYDR090C 933 nt2.5□□□□□ -2.01
VMA16P23968 YER006C-AYER006C-A 318 nt2.5□□□□□ -2.01
VMA16P23968 AGA2YGL032C 264 nt2.5□□□□□ -2.01
VMA16P23968 YJL202CYJL202C 348 nt2.5□□□□□ -2.01
VMA16P23968 RAM2YKL019W 951 nt2.5□□□□□ -2.01
VMA16P23968 YLR154W-FYLR154W-F 141 nt2.5□□□□□ -2.01
VMA16P23968 SEN15YMR059W 387 nt2.5□□□□□ -2.01
VMA16P23968 GOT1YMR292W 417 nt2.5□□□□□ -2.01
VMA16P23968 PEX17YNL214W 600 nt2.5□□□□□ -2.01
VMA16P23968 MSS18YPR134W 807 nt2.5□□□□□ -2.01
VMA16P23968 SLM6YBR266C 453 nt2.5□□□□□ -2.01
VMA16P23968 MGR1YCL044C 1254 nt2.5□□□□□ -2.01
VMA16P23968 SSY1YDR160W 2559 nt2.5□□□□□ -2.01
VMA16P23968 YBT1YLL048C 4986 nt2.49□□□□□ -2.01
VMA16P23968 IKI3YLR384C 4050 nt2.49□□□□□ -2.01
VMA16P23968 SAK1YER129W 3429 nt2.49□□□□□ -2.01
VMA16P23968 NCE101YJL205C 162 nt2.49□□□□□ -2.01
VMA16P23968 AIM32YML050W 936 nt2.49□□□□□ -2.01
VMA16P23968 YMR194C-AYMR194C-A 225 nt2.49□□□□□ -2.01
VMA16P23968 TIF11YMR260C 462 nt2.49□□□□□ -2.01
VMA16P23968 PRP6YBR055C 2700 nt2.49□□□□□ -2.01
VMA16P23968 AKR1YDR264C 2295 nt2.49□□□□□ -2.01
VMA16P23968 BAS1YKR099W 2436 nt2.49□□□□□ -2.01
VMA16P23968 HRD3YLR207W 2502 nt2.48□□□□□ -2.01
VMA16P23968 NUP120YKL057C 3114 nt2.48□□□□□ -2.01
VMA16P23968 HMRA1YCR097W 381 nt2.48□□□□□ -2.01
VMA16P23968 YER188C-AYER188C-A 300 nt2.48□□□□□ -2.01
VMA16P23968 NBL1YHR199C-A 222 nt2.48□□□□□ -2.01
VMA16P23968 CCW14YLR390W-A 717 nt2.48□□□□□ -2.01
VMA16P23968 RPS1AYLR441C 768 nt2.48□□□□□ -2.01
VMA16P23968 FYV12YOR183W 390 nt2.48□□□□□ -2.01
VMA16P23968 YPK1YKL126W 2043 nt2.47□□□□□ -2.01
VMA16P23968 YJL181WYJL181W 1836 nt2.47□□□□□ -2.01
VMA16P23968 NUP82YJL061W 2142 nt2.47□□□□□ -2.01
VMA16P23968 YDR118W-AYDR118W-A 117 nt2.47□□□□□ -2.01
VMA16P23968 YER135CYER135C 393 nt2.47□□□□□ -2.01
VMA16P23968 YKL033W-AYKL033W-A 711 nt2.47□□□□□ -2.01
VMA16P23968 YKL111CYKL111C 336 nt2.47□□□□□ -2.01
VMA16P23968 IRC19YLL033W 693 nt2.47□□□□□ -2.01
VMA16P23968 YOL134CYOL134C 390 nt2.47□□□□□ -2.01
VMA16P23968 CRS5YOR031W 210 nt2.47□□□□□ -2.01
VMA16P23968 YPR089WYPR089W 2667 nt2.47□□□□□ -2.01
VMA16P23968 ECM29YHL030W 5607 nt2.47□□□□□ -2.01
VMA16P23968 AYT1YLL063C 1425 nt2.46□□□□□ -2.02
VMA16P23968 YDL068WYDL068W 330 nt2.46□□□□□ -2.02
VMA16P23968 YDR194W-AYDR194W-A 153 nt2.46□□□□□ -2.02
VMA16P23968 RRF1YHR038W 693 nt2.46□□□□□ -2.02
VMA16P23968 tT(UGU)Q1tT(UGU)Q1 76 nt2.46□□□□□ -2.02
VMA16P23968 MRPL33YMR286W 261 nt2.46□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 21.5 ms