Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRT4P19013 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRT4P19013 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
KRT4P19013 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.55■□□□□ 0.88
KRT4P19013 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT4P19013 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT4P19013 AC092720.2-201ENST00000602388 1665 ntBASIC20.55■□□□□ 0.88
KRT4P19013 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.55■□□□□ 0.88
KRT4P19013 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT4P19013 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT4P19013 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT4P19013 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KRT4P19013 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT4P19013 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT4P19013 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.55■□□□□ 0.88
KRT4P19013 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
KRT4P19013 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT4P19013 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
KRT4P19013 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT4P19013 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.55■□□□□ 0.88
KRT4P19013 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT4P19013 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT4P19013 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KRT4P19013 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
KRT4P19013 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.54■□□□□ 0.88
KRT4P19013 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
KRT4P19013 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KRT4P19013 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT4P19013 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KRT4P19013 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
KRT4P19013 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT4P19013 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT4P19013 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KRT4P19013 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT4P19013 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.54■□□□□ 0.88
KRT4P19013 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KRT4P19013 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KRT4P19013 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KRT4P19013 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.54■□□□□ 0.88
KRT4P19013 AP004607.4-201ENST00000530158 1459 ntBASIC20.54■□□□□ 0.88
KRT4P19013 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT4P19013 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT4P19013 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT4P19013 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT4P19013 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.53■□□□□ 0.88
KRT4P19013 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KRT4P19013 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT4P19013 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT4P19013 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
KRT4P19013 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
KRT4P19013 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.53■□□□□ 0.88
KRT4P19013 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.53■□□□□ 0.88
KRT4P19013 AC105233.4-201ENST00000642045 216 ntBASIC20.53■□□□□ 0.88
KRT4P19013 AC061975.6-201ENST00000579045 1553 ntBASIC20.53■□□□□ 0.88
KRT4P19013 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.53■□□□□ 0.88
KRT4P19013 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.53■□□□□ 0.88
KRT4P19013 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KRT4P19013 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT4P19013 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
KRT4P19013 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT4P19013 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.53■□□□□ 0.88
KRT4P19013 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT4P19013 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT4P19013 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT4P19013 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRT4P19013 SMG8-203ENST00000578922 2178 ntBASIC20.52■□□□□ 0.88
KRT4P19013 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.52■□□□□ 0.88
KRT4P19013 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRT4P19013 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRT4P19013 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRT4P19013 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.52■□□□□ 0.88
KRT4P19013 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KRT4P19013 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.52■□□□□ 0.88
KRT4P19013 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.52■□□□□ 0.88
KRT4P19013 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRT4P19013 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KRT4P19013 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.52■□□□□ 0.87
KRT4P19013 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.51■□□□□ 0.87
KRT4P19013 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
KRT4P19013 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
KRT4P19013 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
KRT4P19013 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
KRT4P19013 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
KRT4P19013 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
KRT4P19013 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KRT4P19013 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.51■□□□□ 0.87
KRT4P19013 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
KRT4P19013 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KRT4P19013 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.51■□□□□ 0.87
KRT4P19013 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.51■□□□□ 0.87
KRT4P19013 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KRT4P19013 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.5■□□□□ 0.87
KRT4P19013 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
KRT4P19013 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.5■□□□□ 0.87
KRT4P19013 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
KRT4P19013 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
KRT4P19013 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KRT4P19013 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.5■□□□□ 0.87
KRT4P19013 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.5■□□□□ 0.87
KRT4P19013 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms