Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSF1P09603 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CSF1P09603 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.69■□□□□ 0.42
CSF1P09603 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSF1P09603 AL138724.1-201ENST00000606771 1088 ntBASIC17.69■□□□□ 0.42
CSF1P09603 AC011298.3-201ENST00000615796 283 ntBASIC17.69■□□□□ 0.42
CSF1P09603 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSF1P09603 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CSF1P09603 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSF1P09603 AL512408.1-201ENST00000569378 2000 ntBASIC17.69■□□□□ 0.42
CSF1P09603 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CSF1P09603 AC018445.3-201ENST00000624177 1945 ntBASIC17.68■□□□□ 0.42
CSF1P09603 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSF1P09603 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSF1P09603 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CSF1P09603 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CSF1P09603 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSF1P09603 IRS3P-201ENST00000223076 1006 ntBASIC17.68■□□□□ 0.42
CSF1P09603 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSF1P09603 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSF1P09603 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.68■□□□□ 0.42
CSF1P09603 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.68■□□□□ 0.42
CSF1P09603 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.68■□□□□ 0.42
CSF1P09603 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.68■□□□□ 0.42
CSF1P09603 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.68■□□□□ 0.42
CSF1P09603 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSF1P09603 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CSF1P09603 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSF1P09603 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSF1P09603 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSF1P09603 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSF1P09603 AC099778.1-201ENST00000568593 1911 ntBASIC17.67■□□□□ 0.42
CSF1P09603 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSF1P09603 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.67■□□□□ 0.42
CSF1P09603 AL162430.1-201ENST00000480705 870 ntBASIC17.67■□□□□ 0.42
CSF1P09603 AC087623.3-201ENST00000607047 1098 ntBASIC17.67■□□□□ 0.42
CSF1P09603 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSF1P09603 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CSF1P09603 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CSF1P09603 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSF1P09603 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSF1P09603 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CSF1P09603 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.66■□□□□ 0.42
CSF1P09603 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSF1P09603 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSF1P09603 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSF1P09603 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSF1P09603 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSF1P09603 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CSF1P09603 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.66■□□□□ 0.42
CSF1P09603 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSF1P09603 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSF1P09603 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CSF1P09603 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CSF1P09603 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.66■□□□□ 0.42
CSF1P09603 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.66■□□□□ 0.42
CSF1P09603 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSF1P09603 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CSF1P09603 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CSF1P09603 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.66■□□□□ 0.42
CSF1P09603 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.66■□□□□ 0.42
CSF1P09603 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSF1P09603 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.65■□□□□ 0.42
CSF1P09603 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSF1P09603 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSF1P09603 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSF1P09603 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSF1P09603 AC099791.1-201ENST00000416440 715 ntBASIC17.65■□□□□ 0.42
CSF1P09603 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSF1P09603 pRNA.6-201ENST00000610482 90 ntBASIC17.65■□□□□ 0.42
CSF1P09603 pRNA.5-201ENST00000612139 90 ntBASIC17.65■□□□□ 0.42
CSF1P09603 pRNA.11-201ENST00000618423 90 ntBASIC17.65■□□□□ 0.42
CSF1P09603 pRNA.13-201ENST00000619112 90 ntBASIC17.65■□□□□ 0.42
CSF1P09603 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
CSF1P09603 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.65■□□□□ 0.42
CSF1P09603 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CSF1P09603 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSF1P09603 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CSF1P09603 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSF1P09603 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSF1P09603 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
CSF1P09603 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
CSF1P09603 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CSF1P09603 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.64■□□□□ 0.42
CSF1P09603 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSF1P09603 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.64■□□□□ 0.41
CSF1P09603 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSF1P09603 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSF1P09603 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSF1P09603 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CSF1P09603 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.64■□□□□ 0.41
CSF1P09603 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CSF1P09603 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CSF1P09603 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.64■□□□□ 0.41
CSF1P09603 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.64■□□□□ 0.41
CSF1P09603 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSF1P09603 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.64■□□□□ 0.41
CSF1P09603 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSF1P09603 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSF1P09603 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms