Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.84■□□□□ 0.77
KRT6AP02538 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
KRT6AP02538 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT6AP02538 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
KRT6AP02538 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT6AP02538 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.84■□□□□ 0.77
KRT6AP02538 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT6AP02538 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
KRT6AP02538 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KRT6AP02538 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KRT6AP02538 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
KRT6AP02538 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KRT6AP02538 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.83■□□□□ 0.77
KRT6AP02538 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
KRT6AP02538 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
KRT6AP02538 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
KRT6AP02538 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
KRT6AP02538 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.83■□□□□ 0.76
KRT6AP02538 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
KRT6AP02538 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
KRT6AP02538 AC116050.2-201ENST00000612102 1779 ntBASIC19.83■□□□□ 0.76
KRT6AP02538 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT6AP02538 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KRT6AP02538 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KRT6AP02538 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT6AP02538 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT6AP02538 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.82■□□□□ 0.76
KRT6AP02538 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
KRT6AP02538 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT6AP02538 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT6AP02538 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.82■□□□□ 0.76
KRT6AP02538 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT6AP02538 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.82■□□□□ 0.76
KRT6AP02538 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
KRT6AP02538 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.82■□□□□ 0.76
KRT6AP02538 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT6AP02538 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.82■□□□□ 0.76
KRT6AP02538 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
KRT6AP02538 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
KRT6AP02538 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KRT6AP02538 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.82■□□□□ 0.76
KRT6AP02538 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
KRT6AP02538 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT6AP02538 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.82■□□□□ 0.76
KRT6AP02538 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT6AP02538 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
KRT6AP02538 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
KRT6AP02538 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.82■□□□□ 0.76
KRT6AP02538 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
KRT6AP02538 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT6AP02538 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
KRT6AP02538 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
KRT6AP02538 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.81■□□□□ 0.76
KRT6AP02538 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.81■□□□□ 0.76
KRT6AP02538 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT6AP02538 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
KRT6AP02538 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
KRT6AP02538 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.81■□□□□ 0.76
KRT6AP02538 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT6AP02538 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.81■□□□□ 0.76
KRT6AP02538 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
KRT6AP02538 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.81■□□□□ 0.76
KRT6AP02538 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
KRT6AP02538 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.81■□□□□ 0.76
KRT6AP02538 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
KRT6AP02538 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.8■□□□□ 0.76
KRT6AP02538 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT6AP02538 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
KRT6AP02538 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT6AP02538 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT6AP02538 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KRT6AP02538 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT6AP02538 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.8■□□□□ 0.76
KRT6AP02538 AC004854.2-201ENST00000608450 1441 ntBASIC19.8■□□□□ 0.76
KRT6AP02538 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT6AP02538 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT6AP02538 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT6AP02538 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT6AP02538 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.8■□□□□ 0.76
KRT6AP02538 ZNRF2P3-201ENST00000424200 374 ntBASIC19.8■□□□□ 0.76
KRT6AP02538 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.8■□□□□ 0.76
KRT6AP02538 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.8■□□□□ 0.76
KRT6AP02538 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.8■□□□□ 0.76
KRT6AP02538 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KRT6AP02538 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT6AP02538 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.8■□□□□ 0.76
KRT6AP02538 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KRT6AP02538 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT6AP02538 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT6AP02538 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
KRT6AP02538 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
KRT6AP02538 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.8■□□□□ 0.76
KRT6AP02538 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
KRT6AP02538 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KRT6AP02538 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT6AP02538 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT6AP02538 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
KRT6AP02538 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
KRT6AP02538 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT6AP02538 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms