Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TOMM40O96008 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TOMM40O96008 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TOMM40O96008 RHOF-204ENST00000537265 699 ntTSL 2 BASIC16.03■□□□□ 0.16
TOMM40O96008 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.03■□□□□ 0.16
TOMM40O96008 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.03■□□□□ 0.16
TOMM40O96008 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TOMM40O96008 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TOMM40O96008 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TOMM40O96008 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC16.03■□□□□ 0.16
TOMM40O96008 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
TOMM40O96008 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TOMM40O96008 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
TOMM40O96008 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TOMM40O96008 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TOMM40O96008 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.02■□□□□ 0.16
TOMM40O96008 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.02■□□□□ 0.16
TOMM40O96008 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TOMM40O96008 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TOMM40O96008 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TOMM40O96008 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC16.02■□□□□ 0.16
TOMM40O96008 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TOMM40O96008 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.02■□□□□ 0.16
TOMM40O96008 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC16.02■□□□□ 0.16
TOMM40O96008 MIR6084-201ENST00000622012 110 ntBASIC16.02■□□□□ 0.16
TOMM40O96008 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.02■□□□□ 0.15
TOMM40O96008 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.02■□□□□ 0.15
TOMM40O96008 AC027702.1-201ENST00000563810 1770 ntBASIC16.02■□□□□ 0.15
TOMM40O96008 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.15
TOMM40O96008 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TOMM40O96008 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
TOMM40O96008 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
TOMM40O96008 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.02■□□□□ 0.15
TOMM40O96008 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TOMM40O96008 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.01■□□□□ 0.15
TOMM40O96008 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TOMM40O96008 AL158211.5-201ENST00000623583 2518 ntBASIC16.01■□□□□ 0.15
TOMM40O96008 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TOMM40O96008 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
TOMM40O96008 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.01■□□□□ 0.15
TOMM40O96008 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TOMM40O96008 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TOMM40O96008 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.01■□□□□ 0.15
TOMM40O96008 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TOMM40O96008 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TOMM40O96008 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TOMM40O96008 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC16.01■□□□□ 0.15
TOMM40O96008 AC020907.5-201ENST00000624372 1936 ntBASIC16.01■□□□□ 0.15
TOMM40O96008 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TOMM40O96008 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.01■□□□□ 0.15
TOMM40O96008 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TOMM40O96008 FP700111.2-201ENST00000619190 1892 ntBASIC16.01■□□□□ 0.15
TOMM40O96008 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TOMM40O96008 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TOMM40O96008 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TOMM40O96008 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TOMM40O96008 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC16■□□□□ 0.15
TOMM40O96008 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TOMM40O96008 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TOMM40O96008 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16■□□□□ 0.15
TOMM40O96008 AC026471.1-201ENST00000564629 3026 ntBASIC16■□□□□ 0.15
TOMM40O96008 LETM1P2-201ENST00000597330 2178 ntBASIC16■□□□□ 0.15
TOMM40O96008 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16■□□□□ 0.15
TOMM40O96008 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16■□□□□ 0.15
TOMM40O96008 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16■□□□□ 0.15
TOMM40O96008 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TOMM40O96008 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
TOMM40O96008 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
TOMM40O96008 AC138907.5-202ENST00000569484 235 ntBASIC16■□□□□ 0.15
TOMM40O96008 AC120498.10-201ENST00000621827 505 ntBASIC16■□□□□ 0.15
TOMM40O96008 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16■□□□□ 0.15
TOMM40O96008 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16■□□□□ 0.15
TOMM40O96008 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TOMM40O96008 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16■□□□□ 0.15
TOMM40O96008 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TOMM40O96008 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TOMM40O96008 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TOMM40O96008 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TOMM40O96008 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TOMM40O96008 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TOMM40O96008 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC15.99■□□□□ 0.15
TOMM40O96008 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC15.99■□□□□ 0.15
TOMM40O96008 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TOMM40O96008 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TOMM40O96008 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TOMM40O96008 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TOMM40O96008 IRS3P-201ENST00000223076 1006 ntBASIC15.99■□□□□ 0.15
TOMM40O96008 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC15.99■□□□□ 0.15
TOMM40O96008 SERP1-208ENST00000491660 830 ntTSL 2 BASIC15.99■□□□□ 0.15
TOMM40O96008 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC15.99■□□□□ 0.15
TOMM40O96008 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC15.99■□□□□ 0.15
TOMM40O96008 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TOMM40O96008 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TOMM40O96008 KRT16P2-201ENST00000414673 1423 ntBASIC15.99■□□□□ 0.15
TOMM40O96008 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC15.99■□□□□ 0.15
TOMM40O96008 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
TOMM40O96008 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TOMM40O96008 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TOMM40O96008 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TOMM40O96008 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms