Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
RAPGEF3O95398 AC093323.1-202ENST00000635031 2045 ntBASIC31.16■■■□□ 2.58
RAPGEF3O95398 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
RAPGEF3O95398 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC31.16■■■□□ 2.58
RAPGEF3O95398 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
RAPGEF3O95398 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC31.16■■■□□ 2.58
RAPGEF3O95398 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
RAPGEF3O95398 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC31.15■■■□□ 2.58
RAPGEF3O95398 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC31.15■■■□□ 2.58
RAPGEF3O95398 AC068473.5-201ENST00000616428 2072 ntBASIC31.15■■■□□ 2.58
RAPGEF3O95398 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC31.15■■■□□ 2.58
RAPGEF3O95398 AC092053.2-201ENST00000640557 1818 ntBASIC31.15■■■□□ 2.58
RAPGEF3O95398 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC31.15■■■□□ 2.58
RAPGEF3O95398 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
RAPGEF3O95398 REXO1L10P-201ENST00000615707 1290 ntBASIC31.15■■■□□ 2.58
RAPGEF3O95398 DECR2-212ENST00000627716 352 ntTSL 2 BASIC31.15■■■□□ 2.58
RAPGEF3O95398 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC31.15■■■□□ 2.58
RAPGEF3O95398 GLDC-219ENST00000640208 420 ntTSL 2 BASIC31.15■■■□□ 2.58
RAPGEF3O95398 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
RAPGEF3O95398 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
RAPGEF3O95398 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
RAPGEF3O95398 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC31.14■■■□□ 2.58
RAPGEF3O95398 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC31.14■■■□□ 2.58
RAPGEF3O95398 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC31.14■■■□□ 2.58
RAPGEF3O95398 MIR1238-201ENST00000408483 83 ntBASIC31.14■■■□□ 2.58
RAPGEF3O95398 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC31.14■■■□□ 2.58
RAPGEF3O95398 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC31.14■■■□□ 2.58
RAPGEF3O95398 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
RAPGEF3O95398 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
RAPGEF3O95398 NARF-205ENST00000412079 1760 ntTSL 5 BASIC31.13■■■□□ 2.57
RAPGEF3O95398 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
RAPGEF3O95398 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
RAPGEF3O95398 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC31.13■■■□□ 2.57
RAPGEF3O95398 FDX2-207ENST00000494368 584 ntTSL 4 BASIC31.13■■■□□ 2.57
RAPGEF3O95398 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC31.13■■■□□ 2.57
RAPGEF3O95398 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
RAPGEF3O95398 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC31.13■■■□□ 2.57
RAPGEF3O95398 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
RAPGEF3O95398 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
RAPGEF3O95398 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC31.13■■■□□ 2.57
RAPGEF3O95398 AC116050.2-201ENST00000612102 1779 ntBASIC31.12■■■□□ 2.57
RAPGEF3O95398 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC31.12■■■□□ 2.57
RAPGEF3O95398 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC31.12■■■□□ 2.57
RAPGEF3O95398 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
RAPGEF3O95398 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
RAPGEF3O95398 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC31.12■■■□□ 2.57
RAPGEF3O95398 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC31.12■■■□□ 2.57
RAPGEF3O95398 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC31.12■■■□□ 2.57
RAPGEF3O95398 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
RAPGEF3O95398 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC31.12■■■□□ 2.57
RAPGEF3O95398 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
RAPGEF3O95398 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
RAPGEF3O95398 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC31.12■■■□□ 2.57
RAPGEF3O95398 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC31.11■■■□□ 2.57
RAPGEF3O95398 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC31.11■■■□□ 2.57
RAPGEF3O95398 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
RAPGEF3O95398 AL390719.1-204ENST00000412397 1219 ntBASIC31.11■■■□□ 2.57
RAPGEF3O95398 AL137013.1-201ENST00000432946 1228 ntBASIC31.11■■■□□ 2.57
RAPGEF3O95398 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC31.11■■■□□ 2.57
RAPGEF3O95398 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
RAPGEF3O95398 KRT16P5-201ENST00000455284 522 ntBASIC31.11■■■□□ 2.57
RAPGEF3O95398 NUDT16P1-203ENST00000513809 620 ntBASIC31.11■■■□□ 2.57
RAPGEF3O95398 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC31.11■■■□□ 2.57
RAPGEF3O95398 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC31.11■■■□□ 2.57
RAPGEF3O95398 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC31.11■■■□□ 2.57
RAPGEF3O95398 AC010947.1-201ENST00000623454 693 ntBASIC31.11■■■□□ 2.57
RAPGEF3O95398 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
RAPGEF3O95398 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
RAPGEF3O95398 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC31.1■■■□□ 2.57
RAPGEF3O95398 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
RAPGEF3O95398 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
RAPGEF3O95398 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
RAPGEF3O95398 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
RAPGEF3O95398 AL390955.1-201ENST00000428694 934 ntBASIC31.1■■■□□ 2.57
RAPGEF3O95398 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC31.1■■■□□ 2.57
RAPGEF3O95398 AC087388.1-201ENST00000571370 1112 ntBASIC31.1■■■□□ 2.57
RAPGEF3O95398 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
RAPGEF3O95398 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
RAPGEF3O95398 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC31.09■■■□□ 2.57
RAPGEF3O95398 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC31.09■■■□□ 2.57
RAPGEF3O95398 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC31.09■■■□□ 2.57
RAPGEF3O95398 AC010542.4-201ENST00000563151 1910 ntBASIC31.09■■■□□ 2.57
RAPGEF3O95398 UNC93B2-201ENST00000285383 730 ntBASIC31.09■■■□□ 2.57
RAPGEF3O95398 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
RAPGEF3O95398 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC31.09■■■□□ 2.57
RAPGEF3O95398 WWOX-216ENST00000569818 525 ntBASIC31.09■■■□□ 2.57
RAPGEF3O95398 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC31.09■■■□□ 2.57
RAPGEF3O95398 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC31.09■■■□□ 2.57
RAPGEF3O95398 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC31.09■■■□□ 2.57
RAPGEF3O95398 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC31.08■■■□□ 2.57
RAPGEF3O95398 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
RAPGEF3O95398 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC31.08■■■□□ 2.57
RAPGEF3O95398 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
RAPGEF3O95398 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
RAPGEF3O95398 AL031963.3-201ENST00000606441 850 ntBASIC31.08■■■□□ 2.57
RAPGEF3O95398 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC31.08■■■□□ 2.57
RAPGEF3O95398 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
RAPGEF3O95398 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC31.08■■■□□ 2.57
RAPGEF3O95398 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
RAPGEF3O95398 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC31.07■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms