Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNX4O95219 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.2■□□□□ 0.66
SNX4O95219 SLC7A5P2-201ENST00000553010 536 ntBASIC19.2■□□□□ 0.66
SNX4O95219 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.2■□□□□ 0.66
SNX4O95219 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.2■□□□□ 0.66
SNX4O95219 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNX4O95219 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.2■□□□□ 0.66
SNX4O95219 AC073111.5-205ENST00000641717 521 ntBASIC19.2■□□□□ 0.66
SNX4O95219 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SNX4O95219 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNX4O95219 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNX4O95219 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SNX4O95219 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SNX4O95219 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.2■□□□□ 0.66
SNX4O95219 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNX4O95219 AL391422.3-201ENST00000603791 2761 ntBASIC19.2■□□□□ 0.66
SNX4O95219 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
SNX4O95219 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SNX4O95219 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.19■□□□□ 0.66
SNX4O95219 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNX4O95219 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.19■□□□□ 0.66
SNX4O95219 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNX4O95219 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNX4O95219 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SNX4O95219 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNX4O95219 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.19■□□□□ 0.66
SNX4O95219 CDCA4P2-201ENST00000441182 718 ntBASIC19.19■□□□□ 0.66
SNX4O95219 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.19■□□□□ 0.66
SNX4O95219 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.19■□□□□ 0.66
SNX4O95219 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SNX4O95219 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
SNX4O95219 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.19■□□□□ 0.66
SNX4O95219 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.19■□□□□ 0.66
SNX4O95219 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.19■□□□□ 0.66
SNX4O95219 AC231657.2-201ENST00000624556 255 ntBASIC19.19■□□□□ 0.66
SNX4O95219 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNX4O95219 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNX4O95219 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNX4O95219 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SNX4O95219 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SNX4O95219 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SNX4O95219 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SNX4O95219 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SNX4O95219 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SNX4O95219 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNX4O95219 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNX4O95219 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNX4O95219 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNX4O95219 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.18■□□□□ 0.66
SNX4O95219 AC026185.1-201ENST00000445748 174 ntBASIC19.18■□□□□ 0.66
SNX4O95219 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.18■□□□□ 0.66
SNX4O95219 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.18■□□□□ 0.66
SNX4O95219 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.18■□□□□ 0.66
SNX4O95219 AC010536.3-201ENST00000620306 533 ntBASIC19.18■□□□□ 0.66
SNX4O95219 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.18■□□□□ 0.66
SNX4O95219 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNX4O95219 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.18■□□□□ 0.66
SNX4O95219 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNX4O95219 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNX4O95219 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNX4O95219 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNX4O95219 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNX4O95219 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNX4O95219 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNX4O95219 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SNX4O95219 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNX4O95219 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
SNX4O95219 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.18■□□□□ 0.66
SNX4O95219 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNX4O95219 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
SNX4O95219 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNX4O95219 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNX4O95219 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNX4O95219 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.17■□□□□ 0.66
SNX4O95219 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.17■□□□□ 0.66
SNX4O95219 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNX4O95219 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNX4O95219 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNX4O95219 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.17■□□□□ 0.66
SNX4O95219 DUX4L16-201ENST00000555130 1264 ntBASIC19.17■□□□□ 0.66
SNX4O95219 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.17■□□□□ 0.66
SNX4O95219 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNX4O95219 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNX4O95219 AC061975.6-201ENST00000579045 1553 ntBASIC19.17■□□□□ 0.66
SNX4O95219 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNX4O95219 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNX4O95219 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNX4O95219 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNX4O95219 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNX4O95219 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.17■□□□□ 0.66
SNX4O95219 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNX4O95219 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.17■□□□□ 0.66
SNX4O95219 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNX4O95219 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNX4O95219 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNX4O95219 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNX4O95219 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNX4O95219 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNX4O95219 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNX4O95219 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms