Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CNOT3O75175 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CNOT3O75175 AC005229.4-201ENST00000610085 2198 ntBASIC19.81■□□□□ 0.76
CNOT3O75175 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.81■□□□□ 0.76
CNOT3O75175 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNOT3O75175 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CNOT3O75175 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CNOT3O75175 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNOT3O75175 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNOT3O75175 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.81■□□□□ 0.76
CNOT3O75175 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CNOT3O75175 POU5F1P4-201ENST00000413175 1085 ntBASIC19.81■□□□□ 0.76
CNOT3O75175 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CNOT3O75175 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNOT3O75175 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CNOT3O75175 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNOT3O75175 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNOT3O75175 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.81■□□□□ 0.76
CNOT3O75175 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CNOT3O75175 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.8■□□□□ 0.76
CNOT3O75175 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNOT3O75175 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.8■□□□□ 0.76
CNOT3O75175 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNOT3O75175 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.8■□□□□ 0.76
CNOT3O75175 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.8■□□□□ 0.76
CNOT3O75175 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.8■□□□□ 0.76
CNOT3O75175 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.8■□□□□ 0.76
CNOT3O75175 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CNOT3O75175 AL138781.1-201ENST00000566567 1274 ntBASIC19.8■□□□□ 0.76
CNOT3O75175 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.8■□□□□ 0.76
CNOT3O75175 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.8■□□□□ 0.76
CNOT3O75175 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CNOT3O75175 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.8■□□□□ 0.76
CNOT3O75175 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNOT3O75175 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNOT3O75175 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNOT3O75175 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNOT3O75175 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CNOT3O75175 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNOT3O75175 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.8■□□□□ 0.76
CNOT3O75175 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNOT3O75175 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CNOT3O75175 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CNOT3O75175 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNOT3O75175 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNOT3O75175 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNOT3O75175 CYP2T1P-201ENST00000432607 1285 ntBASIC19.79■□□□□ 0.76
CNOT3O75175 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CNOT3O75175 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
CNOT3O75175 AC007322.4-201ENST00000509611 723 ntBASIC19.79■□□□□ 0.76
CNOT3O75175 AC133552.2-202ENST00000575694 574 ntBASIC19.79■□□□□ 0.76
CNOT3O75175 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.79■□□□□ 0.76
CNOT3O75175 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNOT3O75175 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.79■□□□□ 0.76
CNOT3O75175 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNOT3O75175 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.79■□□□□ 0.76
CNOT3O75175 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNOT3O75175 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CNOT3O75175 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CNOT3O75175 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.78■□□□□ 0.76
CNOT3O75175 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.78■□□□□ 0.76
CNOT3O75175 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNOT3O75175 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.78■□□□□ 0.76
CNOT3O75175 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNOT3O75175 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CNOT3O75175 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNOT3O75175 AF201337.1-201ENST00000520239 748 ntBASIC19.78■□□□□ 0.76
CNOT3O75175 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.78■□□□□ 0.76
CNOT3O75175 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNOT3O75175 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.78■□□□□ 0.76
CNOT3O75175 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CNOT3O75175 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNOT3O75175 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CNOT3O75175 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
CNOT3O75175 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CNOT3O75175 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CNOT3O75175 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNOT3O75175 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
CNOT3O75175 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNOT3O75175 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CNOT3O75175 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNOT3O75175 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CNOT3O75175 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
CNOT3O75175 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
CNOT3O75175 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CNOT3O75175 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.77■□□□□ 0.76
CNOT3O75175 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.77■□□□□ 0.76
CNOT3O75175 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.77■□□□□ 0.76
CNOT3O75175 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CNOT3O75175 AC105036.2-201ENST00000569468 176 ntBASIC19.77■□□□□ 0.76
CNOT3O75175 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.77■□□□□ 0.76
CNOT3O75175 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.77■□□□□ 0.76
CNOT3O75175 AC120498.10-201ENST00000621827 505 ntBASIC19.77■□□□□ 0.76
CNOT3O75175 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.77■□□□□ 0.76
CNOT3O75175 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CNOT3O75175 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CNOT3O75175 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CNOT3O75175 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNOT3O75175 KRT16P2-201ENST00000414673 1423 ntBASIC19.76■□□□□ 0.75
CNOT3O75175 RBM17P2-201ENST00000616397 1405 ntBASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms