Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
CACNA1FO60840 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
CACNA1FO60840 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CACNA1FO60840 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CACNA1FO60840 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC26.02■■□□□ 1.76
CACNA1FO60840 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CACNA1FO60840 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC26.02■■□□□ 1.76
CACNA1FO60840 AC097658.1-201ENST00000475555 843 ntBASIC26.02■■□□□ 1.76
CACNA1FO60840 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CACNA1FO60840 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC26.02■■□□□ 1.76
CACNA1FO60840 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CACNA1FO60840 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CACNA1FO60840 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC26.02■■□□□ 1.76
CACNA1FO60840 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC26.02■■□□□ 1.76
CACNA1FO60840 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.76
CACNA1FO60840 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.76
CACNA1FO60840 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.76
CACNA1FO60840 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CACNA1FO60840 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CACNA1FO60840 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
CACNA1FO60840 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC26.01■■□□□ 1.75
CACNA1FO60840 PALM-208ENST00000592155 2272 ntTSL 4 BASIC26.01■■□□□ 1.75
CACNA1FO60840 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CACNA1FO60840 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CACNA1FO60840 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CACNA1FO60840 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC26■■□□□ 1.75
CACNA1FO60840 LSM12P1-201ENST00000411836 588 ntBASIC26■■□□□ 1.75
CACNA1FO60840 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC26■■□□□ 1.75
CACNA1FO60840 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC26■■□□□ 1.75
CACNA1FO60840 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC26■■□□□ 1.75
CACNA1FO60840 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
CACNA1FO60840 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
CACNA1FO60840 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
CACNA1FO60840 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC26■■□□□ 1.75
CACNA1FO60840 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC26■■□□□ 1.75
CACNA1FO60840 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC26■■□□□ 1.75
CACNA1FO60840 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC26■■□□□ 1.75
CACNA1FO60840 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC26■■□□□ 1.75
CACNA1FO60840 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
CACNA1FO60840 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CACNA1FO60840 PTBP1P-201ENST00000554374 1601 ntBASIC25.99■■□□□ 1.75
CACNA1FO60840 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
CACNA1FO60840 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC25.99■■□□□ 1.75
CACNA1FO60840 PLK5-205ENST00000642079 1969 ntBASIC25.99■■□□□ 1.75
CACNA1FO60840 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC25.99■■□□□ 1.75
CACNA1FO60840 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CACNA1FO60840 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
CACNA1FO60840 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
CACNA1FO60840 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC25.99■■□□□ 1.75
CACNA1FO60840 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC25.99■■□□□ 1.75
CACNA1FO60840 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CACNA1FO60840 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CACNA1FO60840 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
CACNA1FO60840 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CACNA1FO60840 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
CACNA1FO60840 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
CACNA1FO60840 AC007375.3-201ENST00000600936 2314 ntBASIC25.99■■□□□ 1.75
CACNA1FO60840 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC25.98■■□□□ 1.75
CACNA1FO60840 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC25.98■■□□□ 1.75
CACNA1FO60840 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CACNA1FO60840 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CACNA1FO60840 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CACNA1FO60840 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
CACNA1FO60840 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CACNA1FO60840 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC25.98■■□□□ 1.75
CACNA1FO60840 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
CACNA1FO60840 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC25.98■■□□□ 1.75
CACNA1FO60840 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC25.98■■□□□ 1.75
CACNA1FO60840 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC25.98■■□□□ 1.75
CACNA1FO60840 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CACNA1FO60840 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CACNA1FO60840 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
CACNA1FO60840 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CACNA1FO60840 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC25.97■■□□□ 1.75
CACNA1FO60840 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CACNA1FO60840 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
CACNA1FO60840 AC121338.2-201ENST00000622535 1744 ntBASIC25.97■■□□□ 1.75
CACNA1FO60840 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CACNA1FO60840 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
CACNA1FO60840 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CACNA1FO60840 OR2A1-AS1-201ENST00000462305 773 ntBASIC25.97■■□□□ 1.75
CACNA1FO60840 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC25.97■■□□□ 1.75
CACNA1FO60840 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC25.97■■□□□ 1.75
CACNA1FO60840 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
CACNA1FO60840 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CACNA1FO60840 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CACNA1FO60840 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC25.97■■□□□ 1.75
CACNA1FO60840 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CACNA1FO60840 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
CACNA1FO60840 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CACNA1FO60840 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CACNA1FO60840 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC25.96■■□□□ 1.75
CACNA1FO60840 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC25.96■■□□□ 1.75
CACNA1FO60840 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CACNA1FO60840 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CACNA1FO60840 MIR4651-201ENST00000582622 73 ntBASIC25.96■■□□□ 1.75
CACNA1FO60840 KLF2-202ENST00000592003 564 ntTSL 3 BASIC25.96■■□□□ 1.75
CACNA1FO60840 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC25.96■■□□□ 1.75
CACNA1FO60840 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CACNA1FO60840 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms