Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSSCA1O60232 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SSSCA1O60232 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSSCA1O60232 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SSSCA1O60232 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSSCA1O60232 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SSSCA1O60232 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC16.7■□□□□ 0.26
SSSCA1O60232 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SSSCA1O60232 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
SSSCA1O60232 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSSCA1O60232 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SSSCA1O60232 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
SSSCA1O60232 UNC93B8-201ENST00000511903 705 ntBASIC16.7■□□□□ 0.26
SSSCA1O60232 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SSSCA1O60232 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SSSCA1O60232 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSSCA1O60232 AC092171.4-201ENST00000609130 632 ntBASIC16.7■□□□□ 0.26
SSSCA1O60232 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SSSCA1O60232 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SSSCA1O60232 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
SSSCA1O60232 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SSSCA1O60232 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SSSCA1O60232 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SSSCA1O60232 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.7■□□□□ 0.26
SSSCA1O60232 AC116562.4-201ENST00000641316 2276 ntBASIC16.7■□□□□ 0.26
SSSCA1O60232 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SSSCA1O60232 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSSCA1O60232 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSSCA1O60232 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.69■□□□□ 0.26
SSSCA1O60232 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSSCA1O60232 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSSCA1O60232 AC018445.3-201ENST00000624177 1945 ntBASIC16.69■□□□□ 0.26
SSSCA1O60232 AP005435.1-201ENST00000529293 1178 ntBASIC16.69■□□□□ 0.26
SSSCA1O60232 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSSCA1O60232 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SSSCA1O60232 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SSSCA1O60232 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSSCA1O60232 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
SSSCA1O60232 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSSCA1O60232 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SSSCA1O60232 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSSCA1O60232 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SSSCA1O60232 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSSCA1O60232 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SSSCA1O60232 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SSSCA1O60232 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSSCA1O60232 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SSSCA1O60232 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.68■□□□□ 0.26
SSSCA1O60232 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SSSCA1O60232 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SSSCA1O60232 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSSCA1O60232 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSSCA1O60232 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSSCA1O60232 SRD5A1P1-201ENST00000442297 786 ntBASIC16.68■□□□□ 0.26
SSSCA1O60232 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SSSCA1O60232 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC16.68■□□□□ 0.26
SSSCA1O60232 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.68■□□□□ 0.26
SSSCA1O60232 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSSCA1O60232 TCF3P1-201ENST00000423021 1937 ntBASIC16.68■□□□□ 0.26
SSSCA1O60232 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSSCA1O60232 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
SSSCA1O60232 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSSCA1O60232 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
SSSCA1O60232 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SSSCA1O60232 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SSSCA1O60232 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSSCA1O60232 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.67■□□□□ 0.26
SSSCA1O60232 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSSCA1O60232 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSSCA1O60232 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSSCA1O60232 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC16.67■□□□□ 0.26
SSSCA1O60232 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC16.67■□□□□ 0.26
SSSCA1O60232 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSSCA1O60232 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.67■□□□□ 0.26
SSSCA1O60232 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSSCA1O60232 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
SSSCA1O60232 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSSCA1O60232 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSSCA1O60232 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSSCA1O60232 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSSCA1O60232 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSSCA1O60232 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSSCA1O60232 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SSSCA1O60232 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSSCA1O60232 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSSCA1O60232 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SSSCA1O60232 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.66■□□□□ 0.26
SSSCA1O60232 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSSCA1O60232 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SSSCA1O60232 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSSCA1O60232 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
SSSCA1O60232 PTCHD3P2-201ENST00000424937 1205 ntBASIC16.66■□□□□ 0.26
SSSCA1O60232 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SSSCA1O60232 KRT16P3-201ENST00000439127 1283 ntBASIC16.66■□□□□ 0.26
SSSCA1O60232 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC16.66■□□□□ 0.26
SSSCA1O60232 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC16.66■□□□□ 0.26
SSSCA1O60232 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC16.66■□□□□ 0.26
SSSCA1O60232 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSSCA1O60232 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC16.66■□□□□ 0.26
SSSCA1O60232 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms