Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PRICKLE3O43900 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PRICKLE3O43900 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.74■□□□□ 0.75
PRICKLE3O43900 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PRICKLE3O43900 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PRICKLE3O43900 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.74■□□□□ 0.75
PRICKLE3O43900 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
PRICKLE3O43900 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.74■□□□□ 0.75
PRICKLE3O43900 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.74■□□□□ 0.75
PRICKLE3O43900 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.74■□□□□ 0.75
PRICKLE3O43900 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.74■□□□□ 0.75
PRICKLE3O43900 MIR2861-201ENST00000636310 90 ntBASIC19.74■□□□□ 0.75
PRICKLE3O43900 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PRICKLE3O43900 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PRICKLE3O43900 AC087633.2-202ENST00000565166 1439 ntBASIC19.74■□□□□ 0.75
PRICKLE3O43900 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
PRICKLE3O43900 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRICKLE3O43900 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRICKLE3O43900 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PRICKLE3O43900 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PRICKLE3O43900 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
PRICKLE3O43900 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
PRICKLE3O43900 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
PRICKLE3O43900 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRICKLE3O43900 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PRICKLE3O43900 KRT17P1-201ENST00000399211 1546 ntBASIC19.73■□□□□ 0.75
PRICKLE3O43900 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRICKLE3O43900 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PRICKLE3O43900 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PRICKLE3O43900 KRT18P68-201ENST00000392293 1000 ntBASIC19.73■□□□□ 0.75
PRICKLE3O43900 SLC29A4P1-201ENST00000398760 971 ntBASIC19.73■□□□□ 0.75
PRICKLE3O43900 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PRICKLE3O43900 BX276092.2-201ENST00000417668 665 ntBASIC19.73■□□□□ 0.75
PRICKLE3O43900 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.73■□□□□ 0.75
PRICKLE3O43900 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.73■□□□□ 0.75
PRICKLE3O43900 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.73■□□□□ 0.75
PRICKLE3O43900 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.73■□□□□ 0.75
PRICKLE3O43900 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.73■□□□□ 0.75
PRICKLE3O43900 AL138781.1-201ENST00000566567 1274 ntBASIC19.73■□□□□ 0.75
PRICKLE3O43900 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRICKLE3O43900 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
PRICKLE3O43900 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.73■□□□□ 0.75
PRICKLE3O43900 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PRICKLE3O43900 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRICKLE3O43900 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRICKLE3O43900 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.72■□□□□ 0.75
PRICKLE3O43900 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRICKLE3O43900 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRICKLE3O43900 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.72■□□□□ 0.75
PRICKLE3O43900 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.72■□□□□ 0.75
PRICKLE3O43900 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRICKLE3O43900 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRICKLE3O43900 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PRICKLE3O43900 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.72■□□□□ 0.75
PRICKLE3O43900 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRICKLE3O43900 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRICKLE3O43900 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRICKLE3O43900 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRICKLE3O43900 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.72■□□□□ 0.75
PRICKLE3O43900 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRICKLE3O43900 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.72■□□□□ 0.75
PRICKLE3O43900 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PRICKLE3O43900 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRICKLE3O43900 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRICKLE3O43900 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
PRICKLE3O43900 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRICKLE3O43900 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRICKLE3O43900 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.71■□□□□ 0.75
PRICKLE3O43900 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRICKLE3O43900 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRICKLE3O43900 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.71■□□□□ 0.75
PRICKLE3O43900 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.71■□□□□ 0.75
PRICKLE3O43900 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.71■□□□□ 0.75
PRICKLE3O43900 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
PRICKLE3O43900 AC073210.2-201ENST00000430369 194 ntBASIC19.71■□□□□ 0.75
PRICKLE3O43900 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.71■□□□□ 0.75
PRICKLE3O43900 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.71■□□□□ 0.75
PRICKLE3O43900 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRICKLE3O43900 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PRICKLE3O43900 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.71■□□□□ 0.75
PRICKLE3O43900 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PRICKLE3O43900 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRICKLE3O43900 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRICKLE3O43900 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRICKLE3O43900 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRICKLE3O43900 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRICKLE3O43900 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
PRICKLE3O43900 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.7■□□□□ 0.74
PRICKLE3O43900 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.7■□□□□ 0.74
PRICKLE3O43900 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRICKLE3O43900 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.7■□□□□ 0.74
PRICKLE3O43900 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
PRICKLE3O43900 AC092118.2-201ENST00000613495 667 ntBASIC19.7■□□□□ 0.74
PRICKLE3O43900 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.7■□□□□ 0.74
PRICKLE3O43900 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRICKLE3O43900 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRICKLE3O43900 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.7■□□□□ 0.74
PRICKLE3O43900 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRICKLE3O43900 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRICKLE3O43900 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms