Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPIPA2E9PIF3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPIPA2E9PIF3 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NPIPA2E9PIF3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPIPA2E9PIF3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.69■□□□□ 0.58
NPIPA2E9PIF3 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPIPA2E9PIF3 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NPIPA2E9PIF3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NPIPA2E9PIF3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.69■□□□□ 0.58
NPIPA2E9PIF3 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.69■□□□□ 0.58
NPIPA2E9PIF3 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.69■□□□□ 0.58
NPIPA2E9PIF3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.69■□□□□ 0.58
NPIPA2E9PIF3 AC091874.3-201ENST00000512672 1195 ntBASIC18.69■□□□□ 0.58
NPIPA2E9PIF3 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.69■□□□□ 0.58
NPIPA2E9PIF3 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.69■□□□□ 0.58
NPIPA2E9PIF3 AC083880.1-201ENST00000608266 535 ntBASIC18.69■□□□□ 0.58
NPIPA2E9PIF3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NPIPA2E9PIF3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPIPA2E9PIF3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NPIPA2E9PIF3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.69■□□□□ 0.58
NPIPA2E9PIF3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPIPA2E9PIF3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPIPA2E9PIF3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
NPIPA2E9PIF3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPIPA2E9PIF3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
NPIPA2E9PIF3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
NPIPA2E9PIF3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPIPA2E9PIF3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPIPA2E9PIF3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.68■□□□□ 0.58
NPIPA2E9PIF3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPIPA2E9PIF3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
NPIPA2E9PIF3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.68■□□□□ 0.58
NPIPA2E9PIF3 AL355472.2-201ENST00000422958 438 ntBASIC18.68■□□□□ 0.58
NPIPA2E9PIF3 POU5F1P3-201ENST00000428824 1078 ntBASIC18.68■□□□□ 0.58
NPIPA2E9PIF3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.68■□□□□ 0.58
NPIPA2E9PIF3 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.68■□□□□ 0.58
NPIPA2E9PIF3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.68■□□□□ 0.58
NPIPA2E9PIF3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NPIPA2E9PIF3 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPIPA2E9PIF3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPIPA2E9PIF3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NPIPA2E9PIF3 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.68■□□□□ 0.58
NPIPA2E9PIF3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.68■□□□□ 0.58
NPIPA2E9PIF3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.68■□□□□ 0.58
NPIPA2E9PIF3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPIPA2E9PIF3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
NPIPA2E9PIF3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NPIPA2E9PIF3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.67■□□□□ 0.58
NPIPA2E9PIF3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPIPA2E9PIF3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPIPA2E9PIF3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPIPA2E9PIF3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPIPA2E9PIF3 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPIPA2E9PIF3 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPIPA2E9PIF3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.67■□□□□ 0.58
NPIPA2E9PIF3 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.67■□□□□ 0.58
NPIPA2E9PIF3 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.67■□□□□ 0.58
NPIPA2E9PIF3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.67■□□□□ 0.58
NPIPA2E9PIF3 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.67■□□□□ 0.58
NPIPA2E9PIF3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
NPIPA2E9PIF3 FAM21FP-204ENST00000608637 956 ntBASIC18.67■□□□□ 0.58
NPIPA2E9PIF3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPIPA2E9PIF3 MYC-209ENST00000641252 345 ntBASIC18.67■□□□□ 0.58
NPIPA2E9PIF3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.67■□□□□ 0.58
NPIPA2E9PIF3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.67■□□□□ 0.58
NPIPA2E9PIF3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPIPA2E9PIF3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
NPIPA2E9PIF3 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NPIPA2E9PIF3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPIPA2E9PIF3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPIPA2E9PIF3 AC026310.3-201ENST00000625186 2373 ntBASIC18.67■□□□□ 0.58
NPIPA2E9PIF3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.66■□□□□ 0.58
NPIPA2E9PIF3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
NPIPA2E9PIF3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPIPA2E9PIF3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
NPIPA2E9PIF3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPIPA2E9PIF3 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPIPA2E9PIF3 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPIPA2E9PIF3 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.66■□□□□ 0.58
NPIPA2E9PIF3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
NPIPA2E9PIF3 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.66■□□□□ 0.58
NPIPA2E9PIF3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPIPA2E9PIF3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPIPA2E9PIF3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPIPA2E9PIF3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.66■□□□□ 0.58
NPIPA2E9PIF3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPIPA2E9PIF3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.65■□□□□ 0.58
NPIPA2E9PIF3 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.65■□□□□ 0.58
NPIPA2E9PIF3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NPIPA2E9PIF3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NPIPA2E9PIF3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
NPIPA2E9PIF3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NPIPA2E9PIF3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
NPIPA2E9PIF3 KRT18P29-201ENST00000397031 1267 ntBASIC18.65■□□□□ 0.58
NPIPA2E9PIF3 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
NPIPA2E9PIF3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.65■□□□□ 0.58
NPIPA2E9PIF3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NPIPA2E9PIF3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
NPIPA2E9PIF3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.65■□□□□ 0.58
NPIPA2E9PIF3 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms