Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV6A0A075B6T7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV6A0A075B6T7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
TRAV6A0A075B6T7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV6A0A075B6T7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TRAV6A0A075B6T7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV6A0A075B6T7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV6A0A075B6T7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV6A0A075B6T7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV6A0A075B6T7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV6A0A075B6T7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.56■□□□□ 0.4
TRAV6A0A075B6T7 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV6A0A075B6T7 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TRAV6A0A075B6T7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
TRAV6A0A075B6T7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TRAV6A0A075B6T7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TRAV6A0A075B6T7 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
TRAV6A0A075B6T7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TRAV6A0A075B6T7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV6A0A075B6T7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
TRAV6A0A075B6T7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAV6A0A075B6T7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAV6A0A075B6T7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV6A0A075B6T7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TRAV6A0A075B6T7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV6A0A075B6T7 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV6A0A075B6T7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV6A0A075B6T7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV6A0A075B6T7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.55■□□□□ 0.4
TRAV6A0A075B6T7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAV6A0A075B6T7 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRAV6A0A075B6T7 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV6A0A075B6T7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV6A0A075B6T7 AC009102.2-201ENST00000606772 1639 ntBASIC17.55■□□□□ 0.4
TRAV6A0A075B6T7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
TRAV6A0A075B6T7 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV6A0A075B6T7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRAV6A0A075B6T7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV6A0A075B6T7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC17.55■□□□□ 0.4
TRAV6A0A075B6T7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TRAV6A0A075B6T7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV6A0A075B6T7 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRAV6A0A075B6T7 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TRAV6A0A075B6T7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRAV6A0A075B6T7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRAV6A0A075B6T7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV6A0A075B6T7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.55■□□□□ 0.4
TRAV6A0A075B6T7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV6A0A075B6T7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV6A0A075B6T7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV6A0A075B6T7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAV6A0A075B6T7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV6A0A075B6T7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.54■□□□□ 0.4
TRAV6A0A075B6T7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.54■□□□□ 0.4
TRAV6A0A075B6T7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.54■□□□□ 0.4
TRAV6A0A075B6T7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV6A0A075B6T7 HCG11-201ENST00000411553 5696 ntBASIC17.54■□□□□ 0.4
TRAV6A0A075B6T7 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV6A0A075B6T7 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV6A0A075B6T7 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV6A0A075B6T7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAV6A0A075B6T7 AL499627.2-201ENST00000606283 725 ntBASIC17.54■□□□□ 0.4
TRAV6A0A075B6T7 MIR7108-201ENST00000614319 87 ntBASIC17.54■□□□□ 0.4
TRAV6A0A075B6T7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV6A0A075B6T7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV6A0A075B6T7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV6A0A075B6T7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV6A0A075B6T7 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
TRAV6A0A075B6T7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV6A0A075B6T7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV6A0A075B6T7 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV6A0A075B6T7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.53■□□□□ 0.4
TRAV6A0A075B6T7 AC090340.1-201ENST00000620778 4980 ntBASIC17.53■□□□□ 0.4
TRAV6A0A075B6T7 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV6A0A075B6T7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV6A0A075B6T7 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.53■□□□□ 0.4
TRAV6A0A075B6T7 AP004607.7-201ENST00000527152 1677 ntBASIC17.53■□□□□ 0.4
TRAV6A0A075B6T7 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV6A0A075B6T7 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC17.53■□□□□ 0.4
TRAV6A0A075B6T7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.53■□□□□ 0.4
TRAV6A0A075B6T7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV6A0A075B6T7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV6A0A075B6T7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV6A0A075B6T7 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV6A0A075B6T7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.53■□□□□ 0.4
TRAV6A0A075B6T7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.53■□□□□ 0.4
TRAV6A0A075B6T7 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.53■□□□□ 0.4
TRAV6A0A075B6T7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV6A0A075B6T7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.53■□□□□ 0.4
TRAV6A0A075B6T7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV6A0A075B6T7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV6A0A075B6T7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.53■□□□□ 0.4
TRAV6A0A075B6T7 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV6A0A075B6T7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV6A0A075B6T7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV6A0A075B6T7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TRAV6A0A075B6T7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV6A0A075B6T7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV6A0A075B6T7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV6A0A075B6T7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms