Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL449403.2-201ENST00000624497 2662 ntTSL 2 BASIC8.45□□□□□ -1.06
SNX18Q96RF0 RN7SKP163-201ENST00000363221 330 ntBASIC8.45□□□□□ -1.06
SNX18Q96RF0 TRAV13-2-201ENST00000390439 410 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
SNX18Q96RF0 SMIM30-201ENST00000397764 1070 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SNX18Q96RF0 AL365226.2-201ENST00000418403 397 ntTSL 2 BASIC8.45□□□□□ -1.06
SNX18Q96RF0 ELF5-203ENST00000429939 637 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
SNX18Q96RF0 AC108868.1-201ENST00000431411 554 ntTSL 4 BASIC8.45□□□□□ -1.06
SNX18Q96RF0 UBE2V2P4-201ENST00000447495 259 ntBASIC8.45□□□□□ -1.06
SNX18Q96RF0 RN7SL141P-201ENST00000484215 266 ntBASIC8.45□□□□□ -1.06
SNX18Q96RF0 ZBED5-AS1-201ENST00000501079 1071 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
SNX18Q96RF0 C5orf64-AS1-201ENST00000506550 1265 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
SNX18Q96RF0 AC010261.2-202ENST00000506875 494 ntTSL 5 BASIC8.45□□□□□ -1.06
SNX18Q96RF0 RACK1-225ENST00000511566 825 ntTSL 3 BASIC8.45□□□□□ -1.06
SNX18Q96RF0 SCARNA16-201ENST00000515981 187 ntBASIC8.45□□□□□ -1.06
SNX18Q96RF0 AC024451.2-201ENST00000519856 1108 ntBASIC8.45□□□□□ -1.06
SNX18Q96RF0 IL22-202ENST00000538666 1168 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SNX18Q96RF0 AC005841.1-201ENST00000547042 287 ntTSL 3 BASIC8.45□□□□□ -1.06
SNX18Q96RF0 Metazoa_SRP.53-201ENST00000548393 281 ntBASIC8.45□□□□□ -1.06
SNX18Q96RF0 AC012157.1-201ENST00000549725 501 ntTSL 4 BASIC8.45□□□□□ -1.06
SNX18Q96RF0 AC044798.2-201ENST00000564222 1235 ntBASIC8.45□□□□□ -1.06
SNX18Q96RF0 AC007749.1-201ENST00000564299 585 ntBASIC8.45□□□□□ -1.06
SNX18Q96RF0 AC004706.1-201ENST00000576138 879 ntTSL 3 BASIC8.45□□□□□ -1.06
SNX18Q96RF0 LRRC75A-AS1-223ENST00000581361 843 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
SNX18Q96RF0 AC009303.2-209ENST00000588733 853 ntTSL 5 BASIC8.45□□□□□ -1.06
SNX18Q96RF0 ZNF426-203ENST00000589289 919 ntTSL 2 BASIC8.45□□□□□ -1.06
SNX18Q96RF0 AC005498.2-201ENST00000590579 326 ntTSL 2 BASIC8.45□□□□□ -1.06
SNX18Q96RF0 AP001017.1-201ENST00000591378 482 ntBASIC8.45□□□□□ -1.06
SNX18Q96RF0 SMIM7-214ENST00000597711 1075 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
SNX18Q96RF0 AC005618.1-202ENST00000606674 544 ntTSL 4 BASIC8.45□□□□□ -1.06
SNX18Q96RF0 AC104113.1-201ENST00000607723 479 ntBASIC8.45□□□□□ -1.06
SNX18Q96RF0 DRICH1-202ENST00000614553 687 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SNX18Q96RF0 AC004466.3-201ENST00000615576 546 ntBASIC8.45□□□□□ -1.06
SNX18Q96RF0 CELF2-212ENST00000632728 3827 ntAPPRIS P3 TSL 5 BASIC8.45□□□□□ -1.06
SNX18Q96RF0 ULBP1-201ENST00000229708 3142 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SNX18Q96RF0 IGBP1-202ENST00000356413 1666 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SNX18Q96RF0 AL023755.1-202ENST00000636459 1665 ntTSL 5 BASIC8.45□□□□□ -1.06
SNX18Q96RF0 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SNX18Q96RF0 ZNF252P-208ENST00000592792 2485 ntBASIC8.45□□□□□ -1.06
SNX18Q96RF0 MAT2B-202ENST00000321757 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SNX18Q96RF0 CATSPER3-201ENST00000282611 1367 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SNX18Q96RF0 SERPINB2-205ENST00000457692 2155 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
SNX18Q96RF0 HCRTR2-201ENST00000370862 1837 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SNX18Q96RF0 AL354984.1-201ENST00000371169 1854 ntTSL 2 BASIC8.45□□□□□ -1.06
SNX18Q96RF0 CCT7P2-201ENST00000479109 1454 ntBASIC8.45□□□□□ -1.06
SNX18Q96RF0 PPFIA2-216ENST00000549396 5363 ntAPPRIS P4 TSL 1 (best) BASIC8.44□□□□□ -1.06
SNX18Q96RF0 SLC30A8-201ENST00000427715 5430 ntTSL 2 BASIC8.44□□□□□ -1.06
SNX18Q96RF0 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SNX18Q96RF0 RHBDD1-202ENST00000392062 5151 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
SNX18Q96RF0 AL591222.1-201ENST00000568063 3844 ntBASIC8.44□□□□□ -1.06
SNX18Q96RF0 GNA12-203ENST00000407904 3918 ntTSL 2 BASIC8.44□□□□□ -1.06
SNX18Q96RF0 PCDH15-224ENST00000612394 5765 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
SNX18Q96RF0 ZNF610-203ENST00000403906 2191 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
SNX18Q96RF0 SULT1C2-201ENST00000251481 2795 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SNX18Q96RF0 CASP7-207ENST00000452490 2271 ntTSL 2 BASIC8.44□□□□□ -1.06
SNX18Q96RF0 AL133343.1-201ENST00000375670 846 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SNX18Q96RF0 RNVU1-7-201ENST00000383858 164 ntBASIC8.44□□□□□ -1.06
SNX18Q96RF0 KRTAP9-7-201ENST00000391354 1039 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
SNX18Q96RF0 RPL35P2-201ENST00000402419 363 ntBASIC8.44□□□□□ -1.06
SNX18Q96RF0 RN7SKP194-201ENST00000411328 351 ntBASIC8.44□□□□□ -1.06
SNX18Q96RF0 KCNIP1-204ENST00000411494 684 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SNX18Q96RF0 Z93930.2-202ENST00000418292 208 ntTSL 3 BASIC8.44□□□□□ -1.06
SNX18Q96RF0 AL121983.2-201ENST00000426899 688 ntTSL 3 BASIC8.44□□□□□ -1.06
SNX18Q96RF0 AL023653.1-201ENST00000432513 326 ntTSL 5 BASIC8.44□□□□□ -1.06
SNX18Q96RF0 BX276092.7-201ENST00000433410 623 ntTSL 3 BASIC8.44□□□□□ -1.06
SNX18Q96RF0 AL592103.1-201ENST00000446321 810 ntTSL 2 BASIC8.44□□□□□ -1.06
SNX18Q96RF0 AL590648.3-201ENST00000446962 473 ntTSL 3 BASIC8.44□□□□□ -1.06
SNX18Q96RF0 PRDX2P4-201ENST00000447134 600 ntBASIC8.44□□□□□ -1.06
SNX18Q96RF0 AC119428.2-201ENST00000449958 850 ntTSL 2 BASIC8.44□□□□□ -1.06
SNX18Q96RF0 AL137247.1-201ENST00000461502 764 ntTSL 3 BASIC8.44□□□□□ -1.06
SNX18Q96RF0 RN7SL567P-201ENST00000462015 303 ntBASIC8.44□□□□□ -1.06
SNX18Q96RF0 MPTX1-201ENST00000480235 609 ntBASIC8.44□□□□□ -1.06
SNX18Q96RF0 AP002852.1-201ENST00000489699 385 ntBASIC8.44□□□□□ -1.06
SNX18Q96RF0 AC002384.1-201ENST00000490162 429 ntTSL 3 BASIC8.44□□□□□ -1.06
SNX18Q96RF0 AP000873.2-208ENST00000500634 876 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SNX18Q96RF0 AC011487.1-201ENST00000509280 887 ntBASIC8.44□□□□□ -1.06
SNX18Q96RF0 AC087664.3-201ENST00000524110 328 ntBASIC8.44□□□□□ -1.06
SNX18Q96RF0 OR10Y1P-201ENST00000528485 974 ntBASIC8.44□□□□□ -1.06
SNX18Q96RF0 DAD1-204ENST00000538631 441 ntTSL 2 BASIC8.44□□□□□ -1.06
SNX18Q96RF0 COA4-206ENST00000545127 922 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
SNX18Q96RF0 AC087798.1-201ENST00000547882 534 ntTSL 5 BASIC8.44□□□□□ -1.06
SNX18Q96RF0 KARS-209ENST00000568378 459 ntTSL 5 BASIC8.44□□□□□ -1.06
SNX18Q96RF0 ALOX12-AS1-207ENST00000574377 886 ntTSL 3 BASIC8.44□□□□□ -1.06
SNX18Q96RF0 BICRA-AS1-201ENST00000598376 547 ntTSL 4 BASIC8.44□□□□□ -1.06
SNX18Q96RF0 AC015849.4-201ENST00000603678 421 ntTSL 5 BASIC8.44□□□□□ -1.06
SNX18Q96RF0 BOLA2P2-202ENST00000604904 567 ntBASIC8.44□□□□□ -1.06
SNX18Q96RF0 HIST1H4G-201ENST00000611444 297 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
SNX18Q96RF0 AC126915.3-201ENST00000620111 208 ntBASIC8.44□□□□□ -1.06
SNX18Q96RF0 HFE2-207ENST00000636675 1280 ntTSL 5 BASIC8.44□□□□□ -1.06
SNX18Q96RF0 RUFY3-204ENST00000502653 2342 ntTSL 2 BASIC8.44□□□□□ -1.06
SNX18Q96RF0 OR5H1-202ENST00000641874 5999 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
SNX18Q96RF0 NPY5R-201ENST00000338566 1843 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SNX18Q96RF0 TIMP2-202ENST00000536189 3415 ntTSL 2 BASIC8.44□□□□□ -1.06
SNX18Q96RF0 ACMSD-201ENST00000356140 1321 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SNX18Q96RF0 VNN3-204ENST00000414302 1312 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SNX18Q96RF0 CNR1-205ENST00000468898 1320 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SNX18Q96RF0 AC009055.2-201ENST00000567058 1337 ntTSL 5 BASIC8.44□□□□□ -1.06
SNX18Q96RF0 LINC00838-201ENST00000562956 2936 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SNX18Q96RF0 TRPC5-201ENST00000262839 5839 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SNX18Q96RF0 AC092329.4-202ENST00000638174 1989 ntTSL 2 BASIC8.44□□□□□ -1.06
SNX18Q96RF0 SMIM31-201ENST00000507311 3123 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms