Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
SNX18Q96RF0 AC117945.2-201ENST00000642109 1521 ntBASIC8.47□□□□□ -1.05
SNX18Q96RF0 ELF4-204ENST00000615377 3878 ntTSL 5 BASIC8.47□□□□□ -1.05
SNX18Q96RF0 OPTN-202ENST00000378747 3400 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
SNX18Q96RF0 DGKB-206ENST00000407950 3651 ntTSL 5 BASIC8.47□□□□□ -1.05
SNX18Q96RF0 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC8.47□□□□□ -1.05
SNX18Q96RF0 LINC02042-201ENST00000481624 2022 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
SNX18Q96RF0 SEPT6-203ENST00000354416 4652 ntAPPRIS ALT1 TSL 5 BASIC8.47□□□□□ -1.05
SNX18Q96RF0 ABHD18-201ENST00000388795 5450 ntTSL 5 BASIC8.47□□□□□ -1.05
SNX18Q96RF0 SLC16A7-214ENST00000552024 1815 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
SNX18Q96RF0 RBFOX1-223ENST00000620507 4018 ntTSL 5 BASIC8.47□□□□□ -1.05
SNX18Q96RF0 MEF2C-239ENST00000636294 2576 ntTSL 5 BASIC8.47□□□□□ -1.05
SNX18Q96RF0 C10orf25-201ENST00000625168 3078 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
SNX18Q96RF0 NR2F1-AS1-202ENST00000504474 2868 ntTSL 2 BASIC8.47□□□□□ -1.05
SNX18Q96RF0 OR9Q1-202ENST00000612174 2134 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
SNX18Q96RF0 PXYLP1-207ENST00000508812 4158 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
SNX18Q96RF0 RAI14-220ENST00000512629 2941 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
SNX18Q96RF0 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC8.46□□□□□ -1.05
SNX18Q96RF0 KCTD19-201ENST00000304372 2958 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
SNX18Q96RF0 AL512625.3-201ENST00000586625 1440 ntTSL 3 BASIC8.46□□□□□ -1.05
SNX18Q96RF0 BDNF-204ENST00000395980 4030 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
SNX18Q96RF0 TTC23-203ENST00000394132 3849 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.05
SNX18Q96RF0 DCTN4-202ENST00000446090 1737 ntAPPRIS ALT1 TSL 1 (best) BASIC8.46□□□□□ -1.05
SNX18Q96RF0 TPD52L3-201ENST00000314556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
SNX18Q96RF0 NBPF15-203ENST00000577412 4707 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
SNX18Q96RF0 TENM2-203ENST00000518659 8550 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
SNX18Q96RF0 LINC00672-201ENST00000583195 3692 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
SNX18Q96RF0 SCD-201ENST00000370355 5362 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
SNX18Q96RF0 ANO2-201ENST00000327087 3720 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
SNX18Q96RF0 PWAR5-201ENST00000624480 3180 ntBASIC8.46□□□□□ -1.05
SNX18Q96RF0 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
SNX18Q96RF0 EFCAB13-203ENST00000517484 3466 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.05
SNX18Q96RF0 ST3GAL3-216ENST00000372368 1290 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
SNX18Q96RF0 NUDT5-201ENST00000378927 1258 ntTSL 2 BASIC8.46□□□□□ -1.06
SNX18Q96RF0 MLANA-201ENST00000381471 1000 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
SNX18Q96RF0 NIFKP1-201ENST00000398317 889 ntBASIC8.46□□□□□ -1.06
SNX18Q96RF0 SCG5-202ENST00000413748 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC8.46□□□□□ -1.06
SNX18Q96RF0 MTATP6P19-201ENST00000413797 659 ntBASIC8.46□□□□□ -1.06
SNX18Q96RF0 AC245036.3-201ENST00000429259 146 ntBASIC8.46□□□□□ -1.06
SNX18Q96RF0 AL139142.1-201ENST00000431459 677 ntTSL 5 BASIC8.46□□□□□ -1.06
SNX18Q96RF0 AP001619.1-201ENST00000432411 447 ntTSL 3 BASIC8.46□□□□□ -1.06
SNX18Q96RF0 AC002480.3-201ENST00000439823 557 ntTSL 3 BASIC8.46□□□□□ -1.06
SNX18Q96RF0 AC064862.2-201ENST00000445460 196 ntBASIC8.46□□□□□ -1.06
SNX18Q96RF0 C11orf98P1-201ENST00000446114 318 ntBASIC8.46□□□□□ -1.06
SNX18Q96RF0 AC093582.1-201ENST00000447086 385 ntBASIC8.46□□□□□ -1.06
SNX18Q96RF0 POLR2H-206ENST00000452961 791 ntTSL 2 BASIC8.46□□□□□ -1.06
SNX18Q96RF0 AC096659.1-201ENST00000456728 549 ntTSL 2 BASIC8.46□□□□□ -1.06
SNX18Q96RF0 RN7SL294P-201ENST00000477271 295 ntBASIC8.46□□□□□ -1.06
SNX18Q96RF0 USP9YP2-201ENST00000504503 1000 ntBASIC8.46□□□□□ -1.06
SNX18Q96RF0 USP9YP1-201ENST00000513521 1002 ntBASIC8.46□□□□□ -1.06
SNX18Q96RF0 IGHV7-27-201ENST00000522512 330 ntBASIC8.46□□□□□ -1.06
SNX18Q96RF0 AC023946.1-201ENST00000526867 594 ntTSL 3 BASIC8.46□□□□□ -1.06
SNX18Q96RF0 MBP-228ENST00000527041 582 ntTSL 5 BASIC8.46□□□□□ -1.06
SNX18Q96RF0 RAD52-217ENST00000544742 463 ntTSL 4 BASIC8.46□□□□□ -1.06
SNX18Q96RF0 ANKS1B-213ENST00000549025 2973 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
SNX18Q96RF0 AC010760.1-201ENST00000565129 545 ntTSL 2 BASIC8.46□□□□□ -1.06
SNX18Q96RF0 ELOCP2-201ENST00000566760 332 ntBASIC8.46□□□□□ -1.06
SNX18Q96RF0 AC005381.1-204ENST00000585697 599 ntTSL 3 BASIC8.46□□□□□ -1.06
SNX18Q96RF0 HNRNPA1P52-201ENST00000599047 947 ntBASIC8.46□□□□□ -1.06
SNX18Q96RF0 FBXW7-212ENST00000604872 970 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
SNX18Q96RF0 Z73429.1-201ENST00000610170 345 ntBASIC8.46□□□□□ -1.06
SNX18Q96RF0 IFITM2-206ENST00000616316 892 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
SNX18Q96RF0 KRTAP10-12-202ENST00000618832 282 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
SNX18Q96RF0 AC092139.3-201ENST00000624764 968 ntBASIC8.46□□□□□ -1.06
SNX18Q96RF0 LINC01347-202ENST00000627498 3841 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
SNX18Q96RF0 AC135068.7-201ENST00000630145 568 ntTSL 2 BASIC8.46□□□□□ -1.06
SNX18Q96RF0 FAM240B-201ENST00000637493 1160 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
SNX18Q96RF0 OLMALINC-205ENST00000641708 1184 ntBASIC8.46□□□□□ -1.06
SNX18Q96RF0 OR4K14-202ENST00000641793 1245 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
SNX18Q96RF0 BTN2A2-202ENST00000356709 3590 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
SNX18Q96RF0 PEG3-201ENST00000326441 8723 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
SNX18Q96RF0 MBIP-201ENST00000318473 1586 ntAPPRIS ALT1 TSL 1 (best) BASIC8.46□□□□□ -1.06
SNX18Q96RF0 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
SNX18Q96RF0 AC079466.1-201ENST00000587961 4453 ntTSL 2 BASIC8.46□□□□□ -1.06
SNX18Q96RF0 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC8.46□□□□□ -1.06
SNX18Q96RF0 UBE3B-207ENST00000537063 3600 ntTSL 3 BASIC8.46□□□□□ -1.06
SNX18Q96RF0 CCDC15-203ENST00000529051 3924 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
SNX18Q96RF0 STXBP5L-205ENST00000472879 3067 ntTSL 5 BASIC8.46□□□□□ -1.06
SNX18Q96RF0 OR52B5P-203ENST00000641694 1313 ntBASIC8.46□□□□□ -1.06
SNX18Q96RF0 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC8.46□□□□□ -1.06
SNX18Q96RF0 AEBP2-202ENST00000360995 2533 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.06
SNX18Q96RF0 GABRA1-202ENST00000393943 4686 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
SNX18Q96RF0 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
SNX18Q96RF0 AL445665.1-201ENST00000322495 2599 ntTSL 2 BASIC8.46□□□□□ -1.06
SNX18Q96RF0 FGB-201ENST00000302068 1975 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
SNX18Q96RF0 SAYSD1-202ENST00000373249 1972 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
SNX18Q96RF0 LINC01427-204ENST00000635299 1978 ntTSL 5 BASIC8.46□□□□□ -1.06
SNX18Q96RF0 GPN1-202ENST00000407583 1395 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
SNX18Q96RF0 POLR3G-204ENST00000504930 3251 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
SNX18Q96RF0 HSPD1P5-201ENST00000511127 1720 ntBASIC8.46□□□□□ -1.06
SNX18Q96RF0 CARF-201ENST00000320443 5209 ntTSL 2 BASIC8.46□□□□□ -1.06
SNX18Q96RF0 ANXA2-203ENST00000421017 1444 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
SNX18Q96RF0 LINC00339-210ENST00000635675 1404 ntTSL 5 BASIC8.46□□□□□ -1.06
SNX18Q96RF0 ZNF484-203ENST00000395505 3960 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.06
SNX18Q96RF0 EMC1-202ENST00000375208 4084 ntTSL 2 BASIC8.45□□□□□ -1.06
SNX18Q96RF0 SESTD1-203ENST00000428443 10615 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SNX18Q96RF0 MAP9-201ENST00000311277 7333 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SNX18Q96RF0 PPFIBP1-207ENST00000537927 5719 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
SNX18Q96RF0 ELAVL4-204ENST00000371823 1591 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
SNX18Q96RF0 MAPK10-202ENST00000359221 2668 ntTSL 5 BASIC8.45□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms