Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 HCRTR2-202ENST00000615358 1936 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LMO3Q8TAP4 AC025678.3-201ENST00000623619 4824 ntBASIC9.76□□□□□ -0.85
LMO3Q8TAP4 SIPA1L2-201ENST00000262861 6555 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LMO3Q8TAP4 SHPRH-206ENST00000438092 6994 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
LMO3Q8TAP4 CLN8-201ENST00000331222 7169 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LMO3Q8TAP4 SLFN12-202ENST00000394562 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LMO3Q8TAP4 AC025283.2-203ENST00000618352 2905 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
LMO3Q8TAP4 DCLRE1B-201ENST00000369563 3940 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LMO3Q8TAP4 AC130365.1-201ENST00000530524 1553 ntBASIC9.75□□□□□ -0.85
LMO3Q8TAP4 C7orf71-201ENST00000409974 1956 ntTSL 2 BASIC9.75□□□□□ -0.85
LMO3Q8TAP4 CD164-201ENST00000275080 2954 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
LMO3Q8TAP4 NOL4-201ENST00000261592 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LMO3Q8TAP4 PAK5-202ENST00000378423 4613 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LMO3Q8TAP4 CAST-213ENST00000504465 2336 ntAPPRIS ALT2 TSL 2 BASIC9.75□□□□□ -0.85
LMO3Q8TAP4 TRBV10-1-201ENST00000390364 412 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
LMO3Q8TAP4 TRAV18-201ENST00000390446 440 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
LMO3Q8TAP4 AL031777.1-201ENST00000405418 499 ntBASIC9.75□□□□□ -0.85
LMO3Q8TAP4 PTMA-202ENST00000409115 1221 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LMO3Q8TAP4 LINC00525-201ENST00000412730 1188 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
LMO3Q8TAP4 RFFL-203ENST00000413582 1217 ntTSL 5 BASIC9.75□□□□□ -0.85
LMO3Q8TAP4 AL358781.2-201ENST00000415423 473 ntTSL 3 BASIC9.75□□□□□ -0.85
LMO3Q8TAP4 MAGEA13P-201ENST00000418272 951 ntBASIC9.75□□□□□ -0.85
LMO3Q8TAP4 DUTP8-201ENST00000418412 489 ntBASIC9.75□□□□□ -0.85
LMO3Q8TAP4 AC004448.4-209ENST00000421796 684 ntTSL 5 BASIC9.75□□□□□ -0.85
LMO3Q8TAP4 C4orf51-201ENST00000438731 932 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
LMO3Q8TAP4 AC245884.3-201ENST00000445491 218 ntBASIC9.75□□□□□ -0.85
LMO3Q8TAP4 AL353072.1-201ENST00000446021 442 ntBASIC9.75□□□□□ -0.85
LMO3Q8TAP4 AL683842.1-201ENST00000455505 525 ntBASIC9.75□□□□□ -0.85
LMO3Q8TAP4 SEMA6A-AS1-201ENST00000507558 436 ntTSL 3 BASIC9.75□□□□□ -0.85
LMO3Q8TAP4 AC008581.1-201ENST00000512650 385 ntTSL 3 BASIC9.75□□□□□ -0.85
LMO3Q8TAP4 AC017091.1-201ENST00000513551 1061 ntTSL 5 BASIC9.75□□□□□ -0.85
LMO3Q8TAP4 SDC2-207ENST00000522911 677 ntTSL 3 BASIC9.75□□□□□ -0.85
LMO3Q8TAP4 AC084128.1-201ENST00000523112 501 ntTSL 3 BASIC9.75□□□□□ -0.85
LMO3Q8TAP4 AP001767.1-201ENST00000530976 286 ntBASIC9.75□□□□□ -0.85
LMO3Q8TAP4 C14orf166-206ENST00000556760 851 ntTSL 5 BASIC9.75□□□□□ -0.85
LMO3Q8TAP4 MIR3918-201ENST00000581555 93 ntBASIC9.75□□□□□ -0.85
LMO3Q8TAP4 RN7SL321P-201ENST00000581742 299 ntBASIC9.75□□□□□ -0.85
LMO3Q8TAP4 PDLIM1P2-201ENST00000582923 607 ntBASIC9.75□□□□□ -0.85
LMO3Q8TAP4 AC107990.1-201ENST00000590415 489 ntBASIC9.75□□□□□ -0.85
LMO3Q8TAP4 AC005498.2-201ENST00000590579 326 ntTSL 2 BASIC9.75□□□□□ -0.85
LMO3Q8TAP4 TEX26-AS1-217ENST00000593246 797 ntTSL 5 BASIC9.75□□□□□ -0.85
LMO3Q8TAP4 BNIP3P15-201ENST00000604600 301 ntBASIC9.75□□□□□ -0.85
LMO3Q8TAP4 CAMKMT-210ENST00000613618 594 ntTSL 5 BASIC9.75□□□□□ -0.85
LMO3Q8TAP4 SMIM2-202ENST00000617002 255 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
LMO3Q8TAP4 C1orf132-204ENST00000637970 1170 ntTSL 5 BASIC9.75□□□□□ -0.85
LMO3Q8TAP4 OPTN-202ENST00000378747 3400 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
LMO3Q8TAP4 ZNF583-202ENST00000333201 4916 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
LMO3Q8TAP4 ABCA8-201ENST00000269080 5677 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
LMO3Q8TAP4 FYTTD1-203ENST00000415708 1342 ntTSL 2 BASIC9.75□□□□□ -0.85
LMO3Q8TAP4 ITIH4-201ENST00000266041 3336 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
LMO3Q8TAP4 KANK1-206ENST00000382303 5581 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LMO3Q8TAP4 GRB10-209ENST00000406641 2700 ntTSL 5 BASIC9.75□□□□□ -0.85
LMO3Q8TAP4 LNP1-203ENST00000489752 1813 ntTSL 5 BASIC9.75□□□□□ -0.85
LMO3Q8TAP4 RBM27-201ENST00000265271 6451 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LMO3Q8TAP4 PRRG1-208ENST00000542554 4600 ntAPPRIS P1 TSL 4 BASIC9.75□□□□□ -0.85
LMO3Q8TAP4 GLT8D1-202ENST00000394783 1621 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LMO3Q8TAP4 OR2T1-202ENST00000642005 2104 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
LMO3Q8TAP4 HPS5-203ENST00000396253 4725 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LMO3Q8TAP4 SVIL-201ENST00000355867 7586 ntAPPRIS P4 TSL 1 (best) BASIC9.74□□□□□ -0.85
LMO3Q8TAP4 RBM25-205ENST00000527432 3375 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LMO3Q8TAP4 SALL1-201ENST00000251020 5146 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LMO3Q8TAP4 AP005060.1-201ENST00000623868 3174 ntBASIC9.74□□□□□ -0.85
LMO3Q8TAP4 ABRAXAS1-208ENST00000515303 1732 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LMO3Q8TAP4 OTOA-201ENST00000286149 3471 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
LMO3Q8TAP4 CACNA1C-207ENST00000399597 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
LMO3Q8TAP4 CACNA1C-208ENST00000399601 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
LMO3Q8TAP4 CACNA1C-218ENST00000399644 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
LMO3Q8TAP4 CUBNP1-201ENST00000412710 1790 ntBASIC9.74□□□□□ -0.85
LMO3Q8TAP4 ATP6V1C1-203ENST00000518857 1501 ntTSL 2 BASIC9.74□□□□□ -0.85
LMO3Q8TAP4 OR7G3-201ENST00000305444 939 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
LMO3Q8TAP4 DEFA3-201ENST00000327857 498 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LMO3Q8TAP4 MIR296-201ENST00000385215 80 ntBASIC9.74□□□□□ -0.85
LMO3Q8TAP4 LINC02246-201ENST00000412426 991 ntTSL 5 BASIC9.74□□□□□ -0.85
LMO3Q8TAP4 AL392088.1-201ENST00000428364 670 ntBASIC9.74□□□□□ -0.85
LMO3Q8TAP4 HNRNPA1P39-201ENST00000440547 960 ntBASIC9.74□□□□□ -0.85
LMO3Q8TAP4 AL158819.1-202ENST00000440645 447 ntTSL 2 BASIC9.74□□□□□ -0.85
LMO3Q8TAP4 LINC01006-205ENST00000440711 336 ntTSL 2 BASIC9.74□□□□□ -0.85
LMO3Q8TAP4 AL365356.2-201ENST00000441526 196 ntBASIC9.74□□□□□ -0.85
LMO3Q8TAP4 LINC01526-201ENST00000441949 520 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LMO3Q8TAP4 RPL23P4-201ENST00000442836 416 ntBASIC9.74□□□□□ -0.85
LMO3Q8TAP4 AL135924.1-201ENST00000446146 423 ntBASIC9.74□□□□□ -0.85
LMO3Q8TAP4 RPL10AP3-201ENST00000462503 651 ntBASIC9.74□□□□□ -0.85
LMO3Q8TAP4 TAGLN2P1-201ENST00000524097 587 ntBASIC9.74□□□□□ -0.85
LMO3Q8TAP4 AC034102.4-201ENST00000548595 434 ntTSL 5 BASIC9.74□□□□□ -0.85
LMO3Q8TAP4 PCBP2-213ENST00000548933 1202 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LMO3Q8TAP4 ALOX12-AS1-207ENST00000574377 886 ntTSL 3 BASIC9.74□□□□□ -0.85
LMO3Q8TAP4 MIR4518-201ENST00000580665 83 ntBASIC9.74□□□□□ -0.85
LMO3Q8TAP4 AC011416.3-201ENST00000603971 355 ntBASIC9.74□□□□□ -0.85
LMO3Q8TAP4 TRAM2-AS1-202ENST00000605910 1053 ntTSL 3 BASIC9.74□□□□□ -0.85
LMO3Q8TAP4 AC004853.2-201ENST00000609561 916 ntBASIC9.74□□□□□ -0.85
LMO3Q8TAP4 AP001469.1-202ENST00000626933 695 ntTSL 5 BASIC9.74□□□□□ -0.85
LMO3Q8TAP4 TRIO-225ENST00000639876 769 ntTSL 5 BASIC9.74□□□□□ -0.85
LMO3Q8TAP4 CHURC1-206ENST00000552002 2566 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LMO3Q8TAP4 SPIN4-201ENST00000374884 4117 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
LMO3Q8TAP4 GPR107-201ENST00000347136 7209 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LMO3Q8TAP4 HEPACAM2-203ENST00000440868 2060 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LMO3Q8TAP4 MAST4-203ENST00000403666 7586 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
LMO3Q8TAP4 ATXN1L-201ENST00000427980 7886 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LMO3Q8TAP4 DCTN4-203ENST00000447998 4208 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
LMO3Q8TAP4 ATF2-206ENST00000409635 2109 ntTSL 5 BASIC9.74□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms