Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL160290.1-201ENST00000415509 416 ntTSL 3 BASIC8.51□□□□□ -1.05
SNX18Q96RF0 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC8.51□□□□□ -1.05
SNX18Q96RF0 AC078777.1-201ENST00000425371 777 ntTSL 5 BASIC8.51□□□□□ -1.05
SNX18Q96RF0 UBA52-201ENST00000430157 572 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
SNX18Q96RF0 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC8.51□□□□□ -1.05
SNX18Q96RF0 LINC02020-204ENST00000435548 604 ntTSL 4 BASIC8.51□□□□□ -1.05
SNX18Q96RF0 SLC8A1-AS1-206ENST00000439606 565 ntTSL 4 BASIC8.51□□□□□ -1.05
SNX18Q96RF0 LINC00545-201ENST00000440633 411 ntTSL 2 BASIC8.51□□□□□ -1.05
SNX18Q96RF0 RN7SL50P-201ENST00000461146 298 ntBASIC8.51□□□□□ -1.05
SNX18Q96RF0 IGKV1-6-201ENST00000464162 380 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
SNX18Q96RF0 RN7SL822P-201ENST00000475674 296 ntBASIC8.51□□□□□ -1.05
SNX18Q96RF0 AC131210.1-201ENST00000491347 441 ntTSL 3 BASIC8.51□□□□□ -1.05
SNX18Q96RF0 NDUFB4-205ENST00000492739 309 ntTSL 2 BASIC8.51□□□□□ -1.05
SNX18Q96RF0 IGKV1-9-201ENST00000493819 409 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
SNX18Q96RF0 IGKV1-5-201ENST00000496168 532 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
SNX18Q96RF0 AC110800.1-201ENST00000505498 441 ntTSL 2 BASIC8.51□□□□□ -1.05
SNX18Q96RF0 IGLVV-58-201ENST00000520445 304 ntBASIC8.51□□□□□ -1.05
SNX18Q96RF0 AC016877.2-201ENST00000522128 1069 ntBASIC8.51□□□□□ -1.05
SNX18Q96RF0 KCTD21-AS1-202ENST00000523626 555 ntTSL 4 BASIC8.51□□□□□ -1.05
SNX18Q96RF0 AC107884.1-203ENST00000530846 628 ntTSL 3 BASIC8.51□□□□□ -1.05
SNX18Q96RF0 AC087311.1-201ENST00000553060 1233 ntBASIC8.51□□□□□ -1.05
SNX18Q96RF0 FAM174B-204ENST00000555064 621 ntAPPRIS ALT2 TSL 4 BASIC8.51□□□□□ -1.05
SNX18Q96RF0 AC006146.1-201ENST00000557304 693 ntTSL 5 BASIC8.51□□□□□ -1.05
SNX18Q96RF0 AC092123.1-201ENST00000565623 871 ntTSL 2 BASIC8.51□□□□□ -1.05
SNX18Q96RF0 AC116914.1-201ENST00000575043 398 ntTSL 2 BASIC8.51□□□□□ -1.05
SNX18Q96RF0 AF038458.3-201ENST00000592518 500 ntTSL 3 BASIC8.51□□□□□ -1.05
SNX18Q96RF0 OR4E1-201ENST00000610316 900 ntAPPRIS ALT1 BASIC8.51□□□□□ -1.05
SNX18Q96RF0 AC135048.3-201ENST00000614997 328 ntBASIC8.51□□□□□ -1.05
SNX18Q96RF0 AC135068.9-201ENST00000628927 355 ntBASIC8.51□□□□□ -1.05
SNX18Q96RF0 LINC00595-209ENST00000634389 549 ntTSL 4 BASIC8.51□□□□□ -1.05
SNX18Q96RF0 AC135068.10-201ENST00000638015 913 ntBASIC8.51□□□□□ -1.05
SNX18Q96RF0 HK1-203ENST00000360289 3961 ntTSL 5 BASIC8.51□□□□□ -1.05
SNX18Q96RF0 ACSL1-212ENST00000622937 4103 ntTSL 2 BASIC8.51□□□□□ -1.05
SNX18Q96RF0 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
SNX18Q96RF0 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC8.51□□□□□ -1.05
SNX18Q96RF0 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC8.51□□□□□ -1.05
SNX18Q96RF0 EYA1-207ENST00000419131 1723 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SNX18Q96RF0 BZW2-201ENST00000258761 1860 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
SNX18Q96RF0 MTRR-201ENST00000264668 3274 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SNX18Q96RF0 ERCC6-201ENST00000355832 8008 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
SNX18Q96RF0 NDUFS1-209ENST00000457011 2171 ntTSL 2 BASIC8.51□□□□□ -1.05
SNX18Q96RF0 ERI2-201ENST00000300005 1479 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SNX18Q96RF0 KCND1-202ENST00000376477 3306 ntTSL 2 BASIC8.51□□□□□ -1.05
SNX18Q96RF0 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
SNX18Q96RF0 RBM17-205ENST00000446108 3751 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SNX18Q96RF0 TDGF1-201ENST00000296145 2513 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
SNX18Q96RF0 LINC02011-201ENST00000566553 3830 ntTSL 2 BASIC8.5□□□□□ -1.05
SNX18Q96RF0 AL160408.1-201ENST00000417805 1373 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SNX18Q96RF0 AMBRA1-206ENST00000528950 4102 ntTSL 5 BASIC8.5□□□□□ -1.05
SNX18Q96RF0 FAM126A-202ENST00000409923 3130 ntTSL 5 BASIC8.5□□□□□ -1.05
SNX18Q96RF0 WDR36-204ENST00000513710 3140 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SNX18Q96RF0 RAF1P1-201ENST00000508566 1696 ntBASIC8.5□□□□□ -1.05
SNX18Q96RF0 ZNF2-202ENST00000611463 3737 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SNX18Q96RF0 AC098864.1-202ENST00000507869 2129 ntTSL 2 BASIC8.5□□□□□ -1.05
SNX18Q96RF0 PDE4D-207ENST00000405755 2294 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SNX18Q96RF0 MET-204ENST00000436117 2295 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SNX18Q96RF0 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC8.5□□□□□ -1.05
SNX18Q96RF0 CGNL1-201ENST00000281282 7224 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SNX18Q96RF0 GPRC5D-201ENST00000228887 1038 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
SNX18Q96RF0 NDUFB3-201ENST00000237889 755 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SNX18Q96RF0 MOBP-201ENST00000311042 3388 ntAPPRIS ALT2 TSL 2 BASIC8.5□□□□□ -1.05
SNX18Q96RF0 C6orf58-201ENST00000329722 1200 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SNX18Q96RF0 OR51I2-201ENST00000341449 1070 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
SNX18Q96RF0 ACSL6-206ENST00000379255 2301 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SNX18Q96RF0 AL035696.1-201ENST00000381078 2007 ntTSL 2 BASIC8.5□□□□□ -1.05
SNX18Q96RF0 RNU1-67P-201ENST00000384446 164 ntBASIC8.5□□□□□ -1.05
SNX18Q96RF0 GPRC5D-202ENST00000396333 903 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
SNX18Q96RF0 LINC02271-201ENST00000398777 546 ntTSL 4 BASIC8.5□□□□□ -1.05
SNX18Q96RF0 AC010422.1-201ENST00000414548 543 ntTSL 2 BASIC8.5□□□□□ -1.05
SNX18Q96RF0 IFIT6P-201ENST00000418257 1194 ntBASIC8.5□□□□□ -1.05
SNX18Q96RF0 SNRPCP19-201ENST00000420809 460 ntBASIC8.5□□□□□ -1.05
SNX18Q96RF0 AC113607.1-201ENST00000427019 589 ntTSL 4 BASIC8.5□□□□□ -1.05
SNX18Q96RF0 AL445426.1-201ENST00000427290 547 ntTSL 3 BASIC8.5□□□□□ -1.05
SNX18Q96RF0 AC005154.1-201ENST00000434399 1217 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SNX18Q96RF0 LINC01803-201ENST00000438659 613 ntTSL 2 BASIC8.5□□□□□ -1.05
SNX18Q96RF0 AC083939.1-201ENST00000445475 126 ntBASIC8.5□□□□□ -1.05
SNX18Q96RF0 LINC01280-201ENST00000449783 1184 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SNX18Q96RF0 AL133406.2-201ENST00000452363 1198 ntTSL 2 BASIC8.5□□□□□ -1.05
SNX18Q96RF0 AL020996.1-202ENST00000453649 517 ntTSL 3 BASIC8.5□□□□□ -1.05
SNX18Q96RF0 AC018638.2-201ENST00000471258 403 ntBASIC8.5□□□□□ -1.05
SNX18Q96RF0 RN7SL359P-201ENST00000473502 288 ntBASIC8.5□□□□□ -1.05
SNX18Q96RF0 RN7SL320P-201ENST00000484133 295 ntBASIC8.5□□□□□ -1.05
SNX18Q96RF0 ENO1P3-201ENST00000484903 1224 ntBASIC8.5□□□□□ -1.05
SNX18Q96RF0 AC106795.2-202ENST00000507072 551 ntTSL 5 BASIC8.5□□□□□ -1.05
SNX18Q96RF0 CEP57L1-205ENST00000517392 2771 ntAPPRIS P3 TSL 2 BASIC8.5□□□□□ -1.05
SNX18Q96RF0 LINC02219-201ENST00000520762 454 ntTSL 2 BASIC8.5□□□□□ -1.05
SNX18Q96RF0 AC012574.1-201ENST00000523874 252 ntTSL 5 BASIC8.5□□□□□ -1.05
SNX18Q96RF0 LINC01405-204ENST00000553177 524 ntTSL 4 BASIC8.5□□□□□ -1.05
SNX18Q96RF0 IGHV1OR16-1-201ENST00000568055 392 ntBASIC8.5□□□□□ -1.05
SNX18Q96RF0 AC005324.1-203ENST00000580194 541 ntTSL 5 BASIC8.5□□□□□ -1.05
SNX18Q96RF0 GNAL-210ENST00000602628 1038 ntTSL 2 BASIC8.5□□□□□ -1.05
SNX18Q96RF0 AC026367.2-201ENST00000610630 553 ntBASIC8.5□□□□□ -1.05
SNX18Q96RF0 Metazoa_SRP.204-201ENST00000611908 247 ntBASIC8.5□□□□□ -1.05
SNX18Q96RF0 RN7SL428P-201ENST00000613848 247 ntBASIC8.5□□□□□ -1.05
SNX18Q96RF0 RN7SL331P-201ENST00000618054 247 ntBASIC8.5□□□□□ -1.05
SNX18Q96RF0 AC106886.3-201ENST00000621583 547 ntBASIC8.5□□□□□ -1.05
SNX18Q96RF0 TARS-216ENST00000627006 171 ntTSL 5 BASIC8.5□□□□□ -1.05
SNX18Q96RF0 AC093495.1-214ENST00000627116 559 ntTSL 5 BASIC8.5□□□□□ -1.05
SNX18Q96RF0 OGDH-210ENST00000631326 4116 ntTSL 5 BASIC8.5□□□□□ -1.05
SNX18Q96RF0 AL603840.1-202ENST00000634769 583 ntTSL 5 BASIC8.5□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms