Protein–RNA interactions for Protein: Q9Y5T5

USP16, Ubiquitin carboxyl-terminal hydrolase 16, humanhuman

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP16Q9Y5T5 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC26.37■■□□□ 1.81
USP16Q9Y5T5 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
USP16Q9Y5T5 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
USP16Q9Y5T5 SOX15-203ENST00000570788 1093 ntBASIC26.37■■□□□ 1.81
USP16Q9Y5T5 KLF2-202ENST00000592003 564 ntTSL 3 BASIC26.37■■□□□ 1.81
USP16Q9Y5T5 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC26.37■■□□□ 1.81
USP16Q9Y5T5 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
USP16Q9Y5T5 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
USP16Q9Y5T5 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
USP16Q9Y5T5 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC26.37■■□□□ 1.81
USP16Q9Y5T5 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC26.37■■□□□ 1.81
USP16Q9Y5T5 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
USP16Q9Y5T5 BAALC-201ENST00000297574 801 ntTSL 3 BASIC26.36■■□□□ 1.81
USP16Q9Y5T5 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
USP16Q9Y5T5 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
USP16Q9Y5T5 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC26.36■■□□□ 1.81
USP16Q9Y5T5 OR2A1-AS1-207ENST00000486094 819 ntBASIC26.36■■□□□ 1.81
USP16Q9Y5T5 HES2-205ENST00000487437 968 ntTSL 3 BASIC26.36■■□□□ 1.81
USP16Q9Y5T5 RHOD-202ENST00000532559 538 ntTSL 3 BASIC26.36■■□□□ 1.81
USP16Q9Y5T5 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC26.36■■□□□ 1.81
USP16Q9Y5T5 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
USP16Q9Y5T5 C2orf69P4-201ENST00000565394 541 ntBASIC26.36■■□□□ 1.81
USP16Q9Y5T5 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC26.36■■□□□ 1.81
USP16Q9Y5T5 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
USP16Q9Y5T5 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
USP16Q9Y5T5 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
USP16Q9Y5T5 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC26.36■■□□□ 1.81
USP16Q9Y5T5 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
USP16Q9Y5T5 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
USP16Q9Y5T5 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
USP16Q9Y5T5 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC26.35■■□□□ 1.81
USP16Q9Y5T5 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
USP16Q9Y5T5 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
USP16Q9Y5T5 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
USP16Q9Y5T5 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
USP16Q9Y5T5 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
USP16Q9Y5T5 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
USP16Q9Y5T5 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC26.35■■□□□ 1.81
USP16Q9Y5T5 RPS2P4-201ENST00000476944 856 ntBASIC26.35■■□□□ 1.81
USP16Q9Y5T5 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC26.35■■□□□ 1.81
USP16Q9Y5T5 AC087633.2-202ENST00000565166 1439 ntBASIC26.35■■□□□ 1.81
USP16Q9Y5T5 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC26.35■■□□□ 1.81
USP16Q9Y5T5 MYB-221ENST00000527615 2381 ntTSL 5 BASIC26.35■■□□□ 1.81
USP16Q9Y5T5 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
USP16Q9Y5T5 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
USP16Q9Y5T5 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
USP16Q9Y5T5 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
USP16Q9Y5T5 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
USP16Q9Y5T5 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
USP16Q9Y5T5 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
USP16Q9Y5T5 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
USP16Q9Y5T5 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC26.34■■□□□ 1.81
USP16Q9Y5T5 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
USP16Q9Y5T5 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC26.34■■□□□ 1.81
USP16Q9Y5T5 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC26.34■■□□□ 1.81
USP16Q9Y5T5 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC26.34■■□□□ 1.81
USP16Q9Y5T5 RPPH1-201ENST00000516869 333 ntBASIC26.34■■□□□ 1.81
USP16Q9Y5T5 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC26.34■■□□□ 1.81
USP16Q9Y5T5 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC26.34■■□□□ 1.81
USP16Q9Y5T5 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
USP16Q9Y5T5 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
USP16Q9Y5T5 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
USP16Q9Y5T5 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
USP16Q9Y5T5 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
USP16Q9Y5T5 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
USP16Q9Y5T5 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
USP16Q9Y5T5 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
USP16Q9Y5T5 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC26.33■■□□□ 1.81
USP16Q9Y5T5 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC26.33■■□□□ 1.81
USP16Q9Y5T5 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
USP16Q9Y5T5 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC26.33■■□□□ 1.81
USP16Q9Y5T5 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC26.33■■□□□ 1.81
USP16Q9Y5T5 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC26.33■■□□□ 1.81
USP16Q9Y5T5 RN7SL471P-201ENST00000580476 299 ntBASIC26.33■■□□□ 1.81
USP16Q9Y5T5 USP36-216ENST00000589424 970 ntTSL 5 BASIC26.33■■□□□ 1.81
USP16Q9Y5T5 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
USP16Q9Y5T5 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
USP16Q9Y5T5 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC26.33■■□□□ 1.81
USP16Q9Y5T5 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
USP16Q9Y5T5 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC26.33■■□□□ 1.8
USP16Q9Y5T5 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
USP16Q9Y5T5 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
USP16Q9Y5T5 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
USP16Q9Y5T5 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC26.32■■□□□ 1.8
USP16Q9Y5T5 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC26.32■■□□□ 1.8
USP16Q9Y5T5 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
USP16Q9Y5T5 KRT17P3-201ENST00000420566 1262 ntBASIC26.32■■□□□ 1.8
USP16Q9Y5T5 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC26.32■■□□□ 1.8
USP16Q9Y5T5 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
USP16Q9Y5T5 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
USP16Q9Y5T5 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
USP16Q9Y5T5 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC26.31■■□□□ 1.8
USP16Q9Y5T5 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
USP16Q9Y5T5 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
USP16Q9Y5T5 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC26.31■■□□□ 1.8
USP16Q9Y5T5 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
USP16Q9Y5T5 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
USP16Q9Y5T5 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC26.31■■□□□ 1.8
USP16Q9Y5T5 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
USP16Q9Y5T5 C1QBPP2-201ENST00000528754 825 ntBASIC26.31■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms