Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.94■□□□□ 0.78
PCDHGA3Q9Y5H0 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA3Q9Y5H0 AC093827.2-201ENST00000512654 315 ntBASIC19.94■□□□□ 0.78
PCDHGA3Q9Y5H0 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.94■□□□□ 0.78
PCDHGA3Q9Y5H0 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA3Q9Y5H0 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.94■□□□□ 0.78
PCDHGA3Q9Y5H0 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA3Q9Y5H0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA3Q9Y5H0 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PCDHGA3Q9Y5H0 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.94■□□□□ 0.78
PCDHGA3Q9Y5H0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA3Q9Y5H0 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA3Q9Y5H0 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA3Q9Y5H0 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA3Q9Y5H0 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PCDHGA3Q9Y5H0 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PCDHGA3Q9Y5H0 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDHGA3Q9Y5H0 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.93■□□□□ 0.78
PCDHGA3Q9Y5H0 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.93■□□□□ 0.78
PCDHGA3Q9Y5H0 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA3Q9Y5H0 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDHGA3Q9Y5H0 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PCDHGA3Q9Y5H0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA3Q9Y5H0 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA3Q9Y5H0 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA3Q9Y5H0 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA3Q9Y5H0 AC061975.6-201ENST00000579045 1553 ntBASIC19.92■□□□□ 0.78
PCDHGA3Q9Y5H0 AC080038.3-201ENST00000623346 1952 ntBASIC19.92■□□□□ 0.78
PCDHGA3Q9Y5H0 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA3Q9Y5H0 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA3Q9Y5H0 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA3Q9Y5H0 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA3Q9Y5H0 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA3Q9Y5H0 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PCDHGA3Q9Y5H0 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA3Q9Y5H0 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
PCDHGA3Q9Y5H0 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.92■□□□□ 0.78
PCDHGA3Q9Y5H0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
PCDHGA3Q9Y5H0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.92■□□□□ 0.78
PCDHGA3Q9Y5H0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA3Q9Y5H0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA3Q9Y5H0 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGA3Q9Y5H0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.91■□□□□ 0.78
PCDHGA3Q9Y5H0 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGA3Q9Y5H0 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGA3Q9Y5H0 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.91■□□□□ 0.78
PCDHGA3Q9Y5H0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PCDHGA3Q9Y5H0 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.91■□□□□ 0.78
PCDHGA3Q9Y5H0 DUSP5P2-201ENST00000426873 1033 ntBASIC19.91■□□□□ 0.78
PCDHGA3Q9Y5H0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.91■□□□□ 0.78
PCDHGA3Q9Y5H0 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.91■□□□□ 0.78
PCDHGA3Q9Y5H0 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.91■□□□□ 0.78
PCDHGA3Q9Y5H0 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDHGA3Q9Y5H0 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDHGA3Q9Y5H0 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.91■□□□□ 0.78
PCDHGA3Q9Y5H0 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGA3Q9Y5H0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGA3Q9Y5H0 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDHGA3Q9Y5H0 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDHGA3Q9Y5H0 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGA3Q9Y5H0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PCDHGA3Q9Y5H0 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDHGA3Q9Y5H0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHGA3Q9Y5H0 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PCDHGA3Q9Y5H0 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PCDHGA3Q9Y5H0 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA3Q9Y5H0 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDHGA3Q9Y5H0 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA3Q9Y5H0 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA3Q9Y5H0 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHGA3Q9Y5H0 ESRRAP1-201ENST00000400596 1257 ntBASIC19.9■□□□□ 0.78
PCDHGA3Q9Y5H0 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PCDHGA3Q9Y5H0 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA3Q9Y5H0 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHGA3Q9Y5H0 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDHGA3Q9Y5H0 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA3Q9Y5H0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHGA3Q9Y5H0 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA3Q9Y5H0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA3Q9Y5H0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA3Q9Y5H0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
PCDHGA3Q9Y5H0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA3Q9Y5H0 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PCDHGA3Q9Y5H0 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA3Q9Y5H0 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGA3Q9Y5H0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
PCDHGA3Q9Y5H0 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
PCDHGA3Q9Y5H0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGA3Q9Y5H0 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGA3Q9Y5H0 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
PCDHGA3Q9Y5H0 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
PCDHGA3Q9Y5H0 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
PCDHGA3Q9Y5H0 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGA3Q9Y5H0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.89■□□□□ 0.77
PCDHGA3Q9Y5H0 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.89■□□□□ 0.77
PCDHGA3Q9Y5H0 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
PCDHGA3Q9Y5H0 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGA3Q9Y5H0 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
PCDHGA3Q9Y5H0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.89■□□□□ 0.77
PCDHGA3Q9Y5H0 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms