Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NCKIPSDQ9NZQ3 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NCKIPSDQ9NZQ3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NCKIPSDQ9NZQ3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NCKIPSDQ9NZQ3 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.74■□□□□ 0.91
NCKIPSDQ9NZQ3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NCKIPSDQ9NZQ3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
NCKIPSDQ9NZQ3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.74■□□□□ 0.91
NCKIPSDQ9NZQ3 AC073210.2-201ENST00000430369 194 ntBASIC20.74■□□□□ 0.91
NCKIPSDQ9NZQ3 GUSBP6-202ENST00000438529 1198 ntBASIC20.74■□□□□ 0.91
NCKIPSDQ9NZQ3 CNN2P6-201ENST00000439038 900 ntBASIC20.74■□□□□ 0.91
NCKIPSDQ9NZQ3 EEF1DP3-203ENST00000566025 782 ntBASIC20.74■□□□□ 0.91
NCKIPSDQ9NZQ3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.74■□□□□ 0.91
NCKIPSDQ9NZQ3 AC120498.10-201ENST00000621827 505 ntBASIC20.74■□□□□ 0.91
NCKIPSDQ9NZQ3 TMEM191A-211ENST00000637163 1067 ntBASIC20.74■□□□□ 0.91
NCKIPSDQ9NZQ3 AC133041.1-202ENST00000642053 222 ntBASIC20.74■□□□□ 0.91
NCKIPSDQ9NZQ3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
NCKIPSDQ9NZQ3 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NCKIPSDQ9NZQ3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.74■□□□□ 0.91
NCKIPSDQ9NZQ3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NCKIPSDQ9NZQ3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.74■□□□□ 0.91
NCKIPSDQ9NZQ3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
NCKIPSDQ9NZQ3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NCKIPSDQ9NZQ3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NCKIPSDQ9NZQ3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
NCKIPSDQ9NZQ3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.73■□□□□ 0.91
NCKIPSDQ9NZQ3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NCKIPSDQ9NZQ3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NCKIPSDQ9NZQ3 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
NCKIPSDQ9NZQ3 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
NCKIPSDQ9NZQ3 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.73■□□□□ 0.91
NCKIPSDQ9NZQ3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NCKIPSDQ9NZQ3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NCKIPSDQ9NZQ3 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
NCKIPSDQ9NZQ3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
NCKIPSDQ9NZQ3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.72■□□□□ 0.91
NCKIPSDQ9NZQ3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NCKIPSDQ9NZQ3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NCKIPSDQ9NZQ3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NCKIPSDQ9NZQ3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NCKIPSDQ9NZQ3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.72■□□□□ 0.91
NCKIPSDQ9NZQ3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NCKIPSDQ9NZQ3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NCKIPSDQ9NZQ3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NCKIPSDQ9NZQ3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.72■□□□□ 0.91
NCKIPSDQ9NZQ3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NCKIPSDQ9NZQ3 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NCKIPSDQ9NZQ3 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
NCKIPSDQ9NZQ3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.72■□□□□ 0.91
NCKIPSDQ9NZQ3 KRT18P6-201ENST00000555540 1265 ntBASIC20.72■□□□□ 0.91
NCKIPSDQ9NZQ3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NCKIPSDQ9NZQ3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.72■□□□□ 0.91
NCKIPSDQ9NZQ3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.72■□□□□ 0.91
NCKIPSDQ9NZQ3 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
NCKIPSDQ9NZQ3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NCKIPSDQ9NZQ3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NCKIPSDQ9NZQ3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NCKIPSDQ9NZQ3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NCKIPSDQ9NZQ3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
NCKIPSDQ9NZQ3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
NCKIPSDQ9NZQ3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NCKIPSDQ9NZQ3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NCKIPSDQ9NZQ3 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NCKIPSDQ9NZQ3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NCKIPSDQ9NZQ3 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.71■□□□□ 0.91
NCKIPSDQ9NZQ3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NCKIPSDQ9NZQ3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NCKIPSDQ9NZQ3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.71■□□□□ 0.91
NCKIPSDQ9NZQ3 TERF1P5-201ENST00000477545 1207 ntBASIC20.71■□□□□ 0.91
NCKIPSDQ9NZQ3 AC007322.4-201ENST00000509611 723 ntBASIC20.71■□□□□ 0.91
NCKIPSDQ9NZQ3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.71■□□□□ 0.91
NCKIPSDQ9NZQ3 AC105036.2-201ENST00000569468 176 ntBASIC20.71■□□□□ 0.91
NCKIPSDQ9NZQ3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NCKIPSDQ9NZQ3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NCKIPSDQ9NZQ3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.71■□□□□ 0.91
NCKIPSDQ9NZQ3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
NCKIPSDQ9NZQ3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
NCKIPSDQ9NZQ3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NCKIPSDQ9NZQ3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NCKIPSDQ9NZQ3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NCKIPSDQ9NZQ3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NCKIPSDQ9NZQ3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NCKIPSDQ9NZQ3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NCKIPSDQ9NZQ3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NCKIPSDQ9NZQ3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NCKIPSDQ9NZQ3 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NCKIPSDQ9NZQ3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
NCKIPSDQ9NZQ3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NCKIPSDQ9NZQ3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.7■□□□□ 0.9
NCKIPSDQ9NZQ3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NCKIPSDQ9NZQ3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
NCKIPSDQ9NZQ3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.7■□□□□ 0.9
NCKIPSDQ9NZQ3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.7■□□□□ 0.9
NCKIPSDQ9NZQ3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
NCKIPSDQ9NZQ3 AC069152.1-201ENST00000438030 544 ntBASIC20.7■□□□□ 0.9
NCKIPSDQ9NZQ3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NCKIPSDQ9NZQ3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.7■□□□□ 0.9
NCKIPSDQ9NZQ3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.7■□□□□ 0.9
NCKIPSDQ9NZQ3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NCKIPSDQ9NZQ3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms