Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.56■□□□□ 0.56
HINT3Q9NQE9 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
HINT3Q9NQE9 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HINT3Q9NQE9 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
HINT3Q9NQE9 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HINT3Q9NQE9 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.56■□□□□ 0.56
HINT3Q9NQE9 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HINT3Q9NQE9 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HINT3Q9NQE9 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HINT3Q9NQE9 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HINT3Q9NQE9 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.55■□□□□ 0.56
HINT3Q9NQE9 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
HINT3Q9NQE9 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HINT3Q9NQE9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
HINT3Q9NQE9 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HINT3Q9NQE9 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HINT3Q9NQE9 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
HINT3Q9NQE9 AC026271.2-201ENST00000428091 497 ntBASIC18.55■□□□□ 0.56
HINT3Q9NQE9 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HINT3Q9NQE9 EEF1DP3-203ENST00000566025 782 ntBASIC18.55■□□□□ 0.56
HINT3Q9NQE9 MIR6084-201ENST00000622012 110 ntBASIC18.55■□□□□ 0.56
HINT3Q9NQE9 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HINT3Q9NQE9 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.55■□□□□ 0.56
HINT3Q9NQE9 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.55■□□□□ 0.56
HINT3Q9NQE9 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HINT3Q9NQE9 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HINT3Q9NQE9 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
HINT3Q9NQE9 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.54■□□□□ 0.56
HINT3Q9NQE9 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HINT3Q9NQE9 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.54■□□□□ 0.56
HINT3Q9NQE9 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HINT3Q9NQE9 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
HINT3Q9NQE9 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
HINT3Q9NQE9 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
HINT3Q9NQE9 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.54■□□□□ 0.56
HINT3Q9NQE9 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HINT3Q9NQE9 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HINT3Q9NQE9 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HINT3Q9NQE9 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
HINT3Q9NQE9 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.54■□□□□ 0.56
HINT3Q9NQE9 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HINT3Q9NQE9 AC097381.1-201ENST00000429019 1296 ntBASIC18.54■□□□□ 0.56
HINT3Q9NQE9 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HINT3Q9NQE9 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.54■□□□□ 0.56
HINT3Q9NQE9 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.54■□□□□ 0.56
HINT3Q9NQE9 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.54■□□□□ 0.56
HINT3Q9NQE9 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HINT3Q9NQE9 MIR6821-201ENST00000617625 74 ntBASIC18.54■□□□□ 0.56
HINT3Q9NQE9 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
HINT3Q9NQE9 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
HINT3Q9NQE9 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HINT3Q9NQE9 AC061975.6-201ENST00000579045 1553 ntBASIC18.54■□□□□ 0.56
HINT3Q9NQE9 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
HINT3Q9NQE9 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.54■□□□□ 0.56
HINT3Q9NQE9 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
HINT3Q9NQE9 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HINT3Q9NQE9 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.53■□□□□ 0.56
HINT3Q9NQE9 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.53■□□□□ 0.56
HINT3Q9NQE9 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HINT3Q9NQE9 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HINT3Q9NQE9 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.53■□□□□ 0.56
HINT3Q9NQE9 AC099778.1-201ENST00000568593 1911 ntBASIC18.53■□□□□ 0.56
HINT3Q9NQE9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HINT3Q9NQE9 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.53■□□□□ 0.56
HINT3Q9NQE9 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.53■□□□□ 0.56
HINT3Q9NQE9 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.53■□□□□ 0.56
HINT3Q9NQE9 AC027612.3-201ENST00000413684 1047 ntBASIC18.53■□□□□ 0.56
HINT3Q9NQE9 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.53■□□□□ 0.56
HINT3Q9NQE9 AC053503.5-201ENST00000601508 636 ntBASIC18.53■□□□□ 0.56
HINT3Q9NQE9 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HINT3Q9NQE9 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.53■□□□□ 0.56
HINT3Q9NQE9 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HINT3Q9NQE9 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.53■□□□□ 0.56
HINT3Q9NQE9 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
HINT3Q9NQE9 AP004607.4-201ENST00000530158 1459 ntBASIC18.52■□□□□ 0.56
HINT3Q9NQE9 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HINT3Q9NQE9 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
HINT3Q9NQE9 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
HINT3Q9NQE9 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HINT3Q9NQE9 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.52■□□□□ 0.56
HINT3Q9NQE9 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HINT3Q9NQE9 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HINT3Q9NQE9 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.52■□□□□ 0.56
HINT3Q9NQE9 YBX1P1-201ENST00000445822 960 ntBASIC18.52■□□□□ 0.56
HINT3Q9NQE9 MIR5787-201ENST00000611784 55 ntBASIC18.52■□□□□ 0.56
HINT3Q9NQE9 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HINT3Q9NQE9 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HINT3Q9NQE9 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HINT3Q9NQE9 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.55
HINT3Q9NQE9 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
HINT3Q9NQE9 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HINT3Q9NQE9 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HINT3Q9NQE9 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.51■□□□□ 0.55
HINT3Q9NQE9 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HINT3Q9NQE9 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.51■□□□□ 0.55
HINT3Q9NQE9 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.51■□□□□ 0.55
HINT3Q9NQE9 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HINT3Q9NQE9 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HINT3Q9NQE9 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HINT3Q9NQE9 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms