Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC27.77■■■□□ 2.04
ABCA3Q99758 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC27.77■■■□□ 2.04
ABCA3Q99758 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
ABCA3Q99758 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC27.77■■■□□ 2.04
ABCA3Q99758 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC27.77■■■□□ 2.04
ABCA3Q99758 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC27.77■■■□□ 2.04
ABCA3Q99758 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC27.77■■■□□ 2.04
ABCA3Q99758 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC27.77■■■□□ 2.04
ABCA3Q99758 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC27.76■■■□□ 2.04
ABCA3Q99758 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
ABCA3Q99758 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
ABCA3Q99758 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC27.76■■■□□ 2.03
ABCA3Q99758 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC27.76■■■□□ 2.03
ABCA3Q99758 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
ABCA3Q99758 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC27.76■■■□□ 2.03
ABCA3Q99758 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC27.76■■■□□ 2.03
ABCA3Q99758 FAM99A-202ENST00000538190 1989 ntBASIC27.76■■■□□ 2.03
ABCA3Q99758 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
ABCA3Q99758 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
ABCA3Q99758 RNF146-204ENST00000476956 884 ntTSL 2 BASIC27.75■■■□□ 2.03
ABCA3Q99758 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC27.75■■■□□ 2.03
ABCA3Q99758 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
ABCA3Q99758 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
ABCA3Q99758 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC27.75■■■□□ 2.03
ABCA3Q99758 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
ABCA3Q99758 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC27.75■■■□□ 2.03
ABCA3Q99758 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
ABCA3Q99758 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
ABCA3Q99758 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
ABCA3Q99758 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC27.75■■■□□ 2.03
ABCA3Q99758 AC113347.1-201ENST00000413321 391 ntBASIC27.75■■■□□ 2.03
ABCA3Q99758 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC27.75■■■□□ 2.03
ABCA3Q99758 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC27.75■■■□□ 2.03
ABCA3Q99758 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC27.75■■■□□ 2.03
ABCA3Q99758 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC27.75■■■□□ 2.03
ABCA3Q99758 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC27.75■■■□□ 2.03
ABCA3Q99758 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC27.75■■■□□ 2.03
ABCA3Q99758 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC27.75■■■□□ 2.03
ABCA3Q99758 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
ABCA3Q99758 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
ABCA3Q99758 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
ABCA3Q99758 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
ABCA3Q99758 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC27.74■■■□□ 2.03
ABCA3Q99758 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC27.74■■■□□ 2.03
ABCA3Q99758 AC145285.6-201ENST00000604632 637 ntBASIC27.74■■■□□ 2.03
ABCA3Q99758 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
ABCA3Q99758 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC27.74■■■□□ 2.03
ABCA3Q99758 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC27.74■■■□□ 2.03
ABCA3Q99758 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC27.74■■■□□ 2.03
ABCA3Q99758 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
ABCA3Q99758 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC27.74■■■□□ 2.03
ABCA3Q99758 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
ABCA3Q99758 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
ABCA3Q99758 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
ABCA3Q99758 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC27.73■■■□□ 2.03
ABCA3Q99758 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC27.73■■■□□ 2.03
ABCA3Q99758 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC27.73■■■□□ 2.03
ABCA3Q99758 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
ABCA3Q99758 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC27.73■■■□□ 2.03
ABCA3Q99758 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
ABCA3Q99758 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
ABCA3Q99758 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
ABCA3Q99758 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC27.72■■■□□ 2.03
ABCA3Q99758 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC27.72■■■□□ 2.03
ABCA3Q99758 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC27.72■■■□□ 2.03
ABCA3Q99758 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC27.72■■■□□ 2.03
ABCA3Q99758 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC27.72■■■□□ 2.03
ABCA3Q99758 AC006557.6-201ENST00000623071 864 ntBASIC27.72■■■□□ 2.03
ABCA3Q99758 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC27.72■■■□□ 2.03
ABCA3Q99758 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC27.72■■■□□ 2.03
ABCA3Q99758 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
ABCA3Q99758 HES2-206ENST00000489730 730 ntTSL 2 BASIC27.72■■■□□ 2.03
ABCA3Q99758 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC27.72■■■□□ 2.03
ABCA3Q99758 AL049597.2-201ENST00000565575 961 ntBASIC27.72■■■□□ 2.03
ABCA3Q99758 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC27.72■■■□□ 2.03
ABCA3Q99758 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC27.72■■■□□ 2.03
ABCA3Q99758 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
ABCA3Q99758 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC27.71■■■□□ 2.03
ABCA3Q99758 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC27.71■■■□□ 2.03
ABCA3Q99758 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
ABCA3Q99758 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC27.71■■■□□ 2.03
ABCA3Q99758 AC092053.2-201ENST00000640557 1818 ntBASIC27.71■■■□□ 2.03
ABCA3Q99758 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
ABCA3Q99758 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
ABCA3Q99758 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
ABCA3Q99758 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC27.7■■■□□ 2.03
ABCA3Q99758 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
ABCA3Q99758 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC27.7■■■□□ 2.03
ABCA3Q99758 KRT18P57-201ENST00000443599 1254 ntBASIC27.7■■■□□ 2.03
ABCA3Q99758 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
ABCA3Q99758 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
ABCA3Q99758 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
ABCA3Q99758 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
ABCA3Q99758 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
ABCA3Q99758 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
ABCA3Q99758 PKM-204ENST00000449901 2526 ntTSL 2 BASIC27.7■■■□□ 2.02
ABCA3Q99758 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC27.7■■■□□ 2.02
ABCA3Q99758 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
ABCA3Q99758 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC27.7■■■□□ 2.02
ABCA3Q99758 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC27.7■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms