Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRGV9Q99603 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRGV9Q99603 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.03■□□□□ 0.16
TRGV9Q99603 AC092720.2-201ENST00000602388 1665 ntBASIC16.03■□□□□ 0.16
TRGV9Q99603 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRGV9Q99603 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRGV9Q99603 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC16.03■□□□□ 0.16
TRGV9Q99603 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.03■□□□□ 0.16
TRGV9Q99603 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRGV9Q99603 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRGV9Q99603 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRGV9Q99603 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRGV9Q99603 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TRGV9Q99603 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRGV9Q99603 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRGV9Q99603 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TRGV9Q99603 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.03■□□□□ 0.16
TRGV9Q99603 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRGV9Q99603 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.03■□□□□ 0.16
TRGV9Q99603 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRGV9Q99603 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.02■□□□□ 0.16
TRGV9Q99603 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRGV9Q99603 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.02■□□□□ 0.16
TRGV9Q99603 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.02■□□□□ 0.16
TRGV9Q99603 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRGV9Q99603 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.02■□□□□ 0.16
TRGV9Q99603 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.02■□□□□ 0.16
TRGV9Q99603 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRGV9Q99603 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRGV9Q99603 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRGV9Q99603 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRGV9Q99603 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.02■□□□□ 0.16
TRGV9Q99603 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.02■□□□□ 0.16
TRGV9Q99603 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRGV9Q99603 AC245052.3-201ENST00000450182 901 ntBASIC16.02■□□□□ 0.16
TRGV9Q99603 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRGV9Q99603 AL358852.1-201ENST00000623174 1268 ntBASIC16.02■□□□□ 0.16
TRGV9Q99603 AL136967.2-201ENST00000623968 743 ntBASIC16.02■□□□□ 0.16
TRGV9Q99603 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.02■□□□□ 0.16
TRGV9Q99603 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.02■□□□□ 0.16
TRGV9Q99603 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRGV9Q99603 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRGV9Q99603 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRGV9Q99603 KRT87P-202ENST00000534226 1464 ntBASIC16.02■□□□□ 0.15
TRGV9Q99603 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRGV9Q99603 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRGV9Q99603 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRGV9Q99603 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRGV9Q99603 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRGV9Q99603 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRGV9Q99603 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TRGV9Q99603 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TRGV9Q99603 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC16.01■□□□□ 0.15
TRGV9Q99603 AC079140.4-201ENST00000507448 529 ntBASIC16.01■□□□□ 0.15
TRGV9Q99603 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.01■□□□□ 0.15
TRGV9Q99603 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.01■□□□□ 0.15
TRGV9Q99603 AC120498.10-201ENST00000621827 505 ntBASIC16.01■□□□□ 0.15
TRGV9Q99603 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TRGV9Q99603 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRGV9Q99603 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRGV9Q99603 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRGV9Q99603 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRGV9Q99603 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRGV9Q99603 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.01■□□□□ 0.15
TRGV9Q99603 KRT16P2-201ENST00000414673 1423 ntBASIC16.01■□□□□ 0.15
TRGV9Q99603 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRGV9Q99603 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.01■□□□□ 0.15
TRGV9Q99603 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
TRGV9Q99603 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRGV9Q99603 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC16■□□□□ 0.15
TRGV9Q99603 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRGV9Q99603 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16■□□□□ 0.15
TRGV9Q99603 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
TRGV9Q99603 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TRGV9Q99603 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TRGV9Q99603 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16■□□□□ 0.15
TRGV9Q99603 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16■□□□□ 0.15
TRGV9Q99603 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TRGV9Q99603 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRGV9Q99603 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRGV9Q99603 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC16■□□□□ 0.15
TRGV9Q99603 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16■□□□□ 0.15
TRGV9Q99603 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC16■□□□□ 0.15
TRGV9Q99603 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
TRGV9Q99603 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16■□□□□ 0.15
TRGV9Q99603 AC138907.5-202ENST00000569484 235 ntBASIC16■□□□□ 0.15
TRGV9Q99603 AC110285.6-201ENST00000617652 491 ntBASIC16■□□□□ 0.15
TRGV9Q99603 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16■□□□□ 0.15
TRGV9Q99603 RARRES2P11-201ENST00000635158 484 ntBASIC16■□□□□ 0.15
TRGV9Q99603 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRGV9Q99603 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRGV9Q99603 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRGV9Q99603 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRGV9Q99603 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16■□□□□ 0.15
TRGV9Q99603 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16■□□□□ 0.15
TRGV9Q99603 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRGV9Q99603 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRGV9Q99603 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TRGV9Q99603 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRGV9Q99603 AC099778.1-201ENST00000568593 1911 ntBASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms