Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
PHOX2BQ99453 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.83■□□□□ 0.93
PHOX2BQ99453 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PHOX2BQ99453 RARRES2P10-201ENST00000564312 460 ntBASIC20.83■□□□□ 0.93
PHOX2BQ99453 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
PHOX2BQ99453 AC243732.1-201ENST00000612648 864 ntBASIC20.83■□□□□ 0.93
PHOX2BQ99453 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PHOX2BQ99453 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PHOX2BQ99453 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
PHOX2BQ99453 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
PHOX2BQ99453 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PHOX2BQ99453 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.82■□□□□ 0.92
PHOX2BQ99453 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PHOX2BQ99453 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PHOX2BQ99453 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PHOX2BQ99453 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PHOX2BQ99453 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.82■□□□□ 0.92
PHOX2BQ99453 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.82■□□□□ 0.92
PHOX2BQ99453 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.82■□□□□ 0.92
PHOX2BQ99453 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.82■□□□□ 0.92
PHOX2BQ99453 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.82■□□□□ 0.92
PHOX2BQ99453 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.82■□□□□ 0.92
PHOX2BQ99453 AL589743.5-201ENST00000616611 1050 ntBASIC20.82■□□□□ 0.92
PHOX2BQ99453 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
PHOX2BQ99453 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PHOX2BQ99453 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PHOX2BQ99453 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PHOX2BQ99453 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PHOX2BQ99453 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PHOX2BQ99453 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHOX2BQ99453 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.81■□□□□ 0.92
PHOX2BQ99453 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
PHOX2BQ99453 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.81■□□□□ 0.92
PHOX2BQ99453 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHOX2BQ99453 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHOX2BQ99453 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHOX2BQ99453 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PHOX2BQ99453 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHOX2BQ99453 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.81■□□□□ 0.92
PHOX2BQ99453 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.81■□□□□ 0.92
PHOX2BQ99453 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.81■□□□□ 0.92
PHOX2BQ99453 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
PHOX2BQ99453 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.81■□□□□ 0.92
PHOX2BQ99453 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PHOX2BQ99453 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHOX2BQ99453 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PHOX2BQ99453 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.81■□□□□ 0.92
PHOX2BQ99453 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
PHOX2BQ99453 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PHOX2BQ99453 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PHOX2BQ99453 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
PHOX2BQ99453 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
PHOX2BQ99453 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.81■□□□□ 0.92
PHOX2BQ99453 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHOX2BQ99453 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PHOX2BQ99453 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PHOX2BQ99453 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PHOX2BQ99453 AC073508.3-201ENST00000619697 1419 ntBASIC20.8■□□□□ 0.92
PHOX2BQ99453 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PHOX2BQ99453 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.8■□□□□ 0.92
PHOX2BQ99453 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PHOX2BQ99453 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
PHOX2BQ99453 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PHOX2BQ99453 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.8■□□□□ 0.92
PHOX2BQ99453 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PHOX2BQ99453 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.8■□□□□ 0.92
PHOX2BQ99453 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PHOX2BQ99453 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.8■□□□□ 0.92
PHOX2BQ99453 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.8■□□□□ 0.92
PHOX2BQ99453 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
PHOX2BQ99453 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
PHOX2BQ99453 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.8■□□□□ 0.92
PHOX2BQ99453 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PHOX2BQ99453 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
PHOX2BQ99453 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.79■□□□□ 0.92
PHOX2BQ99453 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PHOX2BQ99453 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
PHOX2BQ99453 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PHOX2BQ99453 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
PHOX2BQ99453 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PHOX2BQ99453 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PHOX2BQ99453 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.79■□□□□ 0.92
PHOX2BQ99453 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.79■□□□□ 0.92
PHOX2BQ99453 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PHOX2BQ99453 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.79■□□□□ 0.92
PHOX2BQ99453 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.79■□□□□ 0.92
PHOX2BQ99453 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PHOX2BQ99453 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PHOX2BQ99453 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
PHOX2BQ99453 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PHOX2BQ99453 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PHOX2BQ99453 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PHOX2BQ99453 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PHOX2BQ99453 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PHOX2BQ99453 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.78■□□□□ 0.92
PHOX2BQ99453 AL137013.1-201ENST00000432946 1228 ntBASIC20.78■□□□□ 0.92
PHOX2BQ99453 AL355355.2-201ENST00000442321 338 ntBASIC20.78■□□□□ 0.92
PHOX2BQ99453 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.78■□□□□ 0.92
PHOX2BQ99453 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PHOX2BQ99453 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms