Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
FOXN4Q96NZ1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.41■□□□□ 0.54
FOXN4Q96NZ1 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXN4Q96NZ1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXN4Q96NZ1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
FOXN4Q96NZ1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXN4Q96NZ1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.41■□□□□ 0.54
FOXN4Q96NZ1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.41■□□□□ 0.54
FOXN4Q96NZ1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.41■□□□□ 0.54
FOXN4Q96NZ1 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
FOXN4Q96NZ1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
FOXN4Q96NZ1 AC104187.1-201ENST00000607510 612 ntBASIC18.41■□□□□ 0.54
FOXN4Q96NZ1 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
FOXN4Q96NZ1 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXN4Q96NZ1 AC073314.1-201ENST00000568729 2216 ntBASIC18.41■□□□□ 0.54
FOXN4Q96NZ1 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
FOXN4Q96NZ1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FOXN4Q96NZ1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.4■□□□□ 0.54
FOXN4Q96NZ1 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXN4Q96NZ1 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.4■□□□□ 0.54
FOXN4Q96NZ1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
FOXN4Q96NZ1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
FOXN4Q96NZ1 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
FOXN4Q96NZ1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.4■□□□□ 0.54
FOXN4Q96NZ1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.4■□□□□ 0.54
FOXN4Q96NZ1 AC008175.2-201ENST00000612840 297 ntBASIC18.4■□□□□ 0.54
FOXN4Q96NZ1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.4■□□□□ 0.54
FOXN4Q96NZ1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXN4Q96NZ1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXN4Q96NZ1 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXN4Q96NZ1 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FOXN4Q96NZ1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
FOXN4Q96NZ1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
FOXN4Q96NZ1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
FOXN4Q96NZ1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
FOXN4Q96NZ1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXN4Q96NZ1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXN4Q96NZ1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.39■□□□□ 0.53
FOXN4Q96NZ1 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.39■□□□□ 0.53
FOXN4Q96NZ1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXN4Q96NZ1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FOXN4Q96NZ1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FOXN4Q96NZ1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
FOXN4Q96NZ1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXN4Q96NZ1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXN4Q96NZ1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FOXN4Q96NZ1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN4Q96NZ1 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.38■□□□□ 0.53
FOXN4Q96NZ1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN4Q96NZ1 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN4Q96NZ1 FP700111.2-201ENST00000619190 1892 ntBASIC18.38■□□□□ 0.53
FOXN4Q96NZ1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.38■□□□□ 0.53
FOXN4Q96NZ1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN4Q96NZ1 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.38■□□□□ 0.53
FOXN4Q96NZ1 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN4Q96NZ1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN4Q96NZ1 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.38■□□□□ 0.53
FOXN4Q96NZ1 SLC7A5P2-201ENST00000553010 536 ntBASIC18.38■□□□□ 0.53
FOXN4Q96NZ1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.38■□□□□ 0.53
FOXN4Q96NZ1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.38■□□□□ 0.53
FOXN4Q96NZ1 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN4Q96NZ1 LINC01521-201ENST00000504184 1943 ntBASIC18.38■□□□□ 0.53
FOXN4Q96NZ1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FOXN4Q96NZ1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXN4Q96NZ1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXN4Q96NZ1 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXN4Q96NZ1 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
FOXN4Q96NZ1 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.37■□□□□ 0.53
FOXN4Q96NZ1 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXN4Q96NZ1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
FOXN4Q96NZ1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.37■□□□□ 0.53
FOXN4Q96NZ1 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.37■□□□□ 0.53
FOXN4Q96NZ1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.37■□□□□ 0.53
FOXN4Q96NZ1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.37■□□□□ 0.53
FOXN4Q96NZ1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.37■□□□□ 0.53
FOXN4Q96NZ1 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.37■□□□□ 0.53
FOXN4Q96NZ1 AC138907.5-202ENST00000569484 235 ntBASIC18.37■□□□□ 0.53
FOXN4Q96NZ1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.37■□□□□ 0.53
FOXN4Q96NZ1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.37■□□□□ 0.53
FOXN4Q96NZ1 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
FOXN4Q96NZ1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.37■□□□□ 0.53
FOXN4Q96NZ1 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXN4Q96NZ1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXN4Q96NZ1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXN4Q96NZ1 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.37■□□□□ 0.53
FOXN4Q96NZ1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXN4Q96NZ1 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXN4Q96NZ1 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
FOXN4Q96NZ1 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
FOXN4Q96NZ1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXN4Q96NZ1 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXN4Q96NZ1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXN4Q96NZ1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
FOXN4Q96NZ1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FOXN4Q96NZ1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
FOXN4Q96NZ1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
FOXN4Q96NZ1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.36■□□□□ 0.53
FOXN4Q96NZ1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FOXN4Q96NZ1 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.36■□□□□ 0.53
FOXN4Q96NZ1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms