Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ZNF48Q96MX3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF48Q96MX3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF48Q96MX3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF48Q96MX3 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF48Q96MX3 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF48Q96MX3 GCSHP5-201ENST00000443090 522 ntBASIC16.74■□□□□ 0.27
ZNF48Q96MX3 AC128676.1-201ENST00000454392 318 ntBASIC16.74■□□□□ 0.27
ZNF48Q96MX3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF48Q96MX3 UNC93B5-201ENST00000530315 699 ntBASIC16.74■□□□□ 0.27
ZNF48Q96MX3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.74■□□□□ 0.27
ZNF48Q96MX3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.74■□□□□ 0.27
ZNF48Q96MX3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF48Q96MX3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF48Q96MX3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
ZNF48Q96MX3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF48Q96MX3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
ZNF48Q96MX3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF48Q96MX3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC16.74■□□□□ 0.27
ZNF48Q96MX3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC16.74■□□□□ 0.27
ZNF48Q96MX3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF48Q96MX3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF48Q96MX3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF48Q96MX3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF48Q96MX3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
ZNF48Q96MX3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF48Q96MX3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC16.73■□□□□ 0.27
ZNF48Q96MX3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF48Q96MX3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
ZNF48Q96MX3 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF48Q96MX3 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
ZNF48Q96MX3 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.73■□□□□ 0.27
ZNF48Q96MX3 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.73■□□□□ 0.27
ZNF48Q96MX3 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.73■□□□□ 0.27
ZNF48Q96MX3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.73■□□□□ 0.27
ZNF48Q96MX3 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.73■□□□□ 0.27
ZNF48Q96MX3 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF48Q96MX3 AC100791.3-201ENST00000617619 330 ntBASIC16.73■□□□□ 0.27
ZNF48Q96MX3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF48Q96MX3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF48Q96MX3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF48Q96MX3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.73■□□□□ 0.27
ZNF48Q96MX3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF48Q96MX3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF48Q96MX3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC16.73■□□□□ 0.27
ZNF48Q96MX3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
ZNF48Q96MX3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF48Q96MX3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
ZNF48Q96MX3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF48Q96MX3 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF48Q96MX3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC16.72■□□□□ 0.27
ZNF48Q96MX3 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF48Q96MX3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF48Q96MX3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF48Q96MX3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF48Q96MX3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC16.72■□□□□ 0.27
ZNF48Q96MX3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF48Q96MX3 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF48Q96MX3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF48Q96MX3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.72■□□□□ 0.27
ZNF48Q96MX3 AC026366.1-201ENST00000488803 879 ntBASIC16.72■□□□□ 0.27
ZNF48Q96MX3 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF48Q96MX3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF48Q96MX3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF48Q96MX3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF48Q96MX3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF48Q96MX3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF48Q96MX3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF48Q96MX3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF48Q96MX3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16.72■□□□□ 0.27
ZNF48Q96MX3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16.72■□□□□ 0.27
ZNF48Q96MX3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
ZNF48Q96MX3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF48Q96MX3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF48Q96MX3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC16.71■□□□□ 0.27
ZNF48Q96MX3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.71■□□□□ 0.27
ZNF48Q96MX3 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.71■□□□□ 0.27
ZNF48Q96MX3 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.71■□□□□ 0.27
ZNF48Q96MX3 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.71■□□□□ 0.27
ZNF48Q96MX3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.71■□□□□ 0.27
ZNF48Q96MX3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
ZNF48Q96MX3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF48Q96MX3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
ZNF48Q96MX3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC16.71■□□□□ 0.26
ZNF48Q96MX3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF48Q96MX3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF48Q96MX3 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC16.7■□□□□ 0.26
ZNF48Q96MX3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF48Q96MX3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC16.7■□□□□ 0.26
ZNF48Q96MX3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF48Q96MX3 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
ZNF48Q96MX3 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF48Q96MX3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF48Q96MX3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
ZNF48Q96MX3 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF48Q96MX3 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.7■□□□□ 0.26
ZNF48Q96MX3 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.7■□□□□ 0.26
ZNF48Q96MX3 AL158047.1-201ENST00000445918 881 ntBASIC16.7■□□□□ 0.26
ZNF48Q96MX3 AP003097.1-201ENST00000530657 1135 ntBASIC16.7■□□□□ 0.26
ZNF48Q96MX3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms