Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF31Q96EP0 POU5F1P3-201ENST00000428824 1078 ntBASIC19.8■□□□□ 0.76
RNF31Q96EP0 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.8■□□□□ 0.76
RNF31Q96EP0 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF31Q96EP0 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RNF31Q96EP0 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.8■□□□□ 0.76
RNF31Q96EP0 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.8■□□□□ 0.76
RNF31Q96EP0 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.8■□□□□ 0.76
RNF31Q96EP0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF31Q96EP0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
RNF31Q96EP0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.79■□□□□ 0.76
RNF31Q96EP0 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF31Q96EP0 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RNF31Q96EP0 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
RNF31Q96EP0 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RNF31Q96EP0 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF31Q96EP0 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF31Q96EP0 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF31Q96EP0 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RNF31Q96EP0 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.79■□□□□ 0.76
RNF31Q96EP0 AC091799.1-201ENST00000422823 811 ntBASIC19.79■□□□□ 0.76
RNF31Q96EP0 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
RNF31Q96EP0 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF31Q96EP0 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
RNF31Q96EP0 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF31Q96EP0 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
RNF31Q96EP0 AC092118.2-201ENST00000613495 667 ntBASIC19.79■□□□□ 0.76
RNF31Q96EP0 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF31Q96EP0 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF31Q96EP0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF31Q96EP0 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF31Q96EP0 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.78■□□□□ 0.76
RNF31Q96EP0 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF31Q96EP0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF31Q96EP0 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF31Q96EP0 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF31Q96EP0 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF31Q96EP0 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF31Q96EP0 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF31Q96EP0 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF31Q96EP0 KRT18P29-201ENST00000397031 1267 ntBASIC19.78■□□□□ 0.76
RNF31Q96EP0 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF31Q96EP0 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF31Q96EP0 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
RNF31Q96EP0 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.78■□□□□ 0.76
RNF31Q96EP0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.78■□□□□ 0.76
RNF31Q96EP0 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF31Q96EP0 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF31Q96EP0 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.77■□□□□ 0.76
RNF31Q96EP0 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
RNF31Q96EP0 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.77■□□□□ 0.76
RNF31Q96EP0 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RNF31Q96EP0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF31Q96EP0 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
RNF31Q96EP0 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RNF31Q96EP0 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RNF31Q96EP0 AC073210.2-201ENST00000430369 194 ntBASIC19.77■□□□□ 0.76
RNF31Q96EP0 AC091874.3-201ENST00000512672 1195 ntBASIC19.77■□□□□ 0.76
RNF31Q96EP0 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
RNF31Q96EP0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF31Q96EP0 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.77■□□□□ 0.76
RNF31Q96EP0 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
RNF31Q96EP0 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.77■□□□□ 0.75
RNF31Q96EP0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RNF31Q96EP0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RNF31Q96EP0 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF31Q96EP0 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF31Q96EP0 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF31Q96EP0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF31Q96EP0 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF31Q96EP0 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF31Q96EP0 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF31Q96EP0 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF31Q96EP0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RNF31Q96EP0 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF31Q96EP0 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF31Q96EP0 PRORSD1P-201ENST00000295112 541 ntBASIC19.76■□□□□ 0.75
RNF31Q96EP0 LSM12P1-201ENST00000411836 588 ntBASIC19.76■□□□□ 0.75
RNF31Q96EP0 AL512625.2-201ENST00000417533 625 ntBASIC19.76■□□□□ 0.75
RNF31Q96EP0 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF31Q96EP0 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RNF31Q96EP0 AC097658.1-201ENST00000475555 843 ntBASIC19.76■□□□□ 0.75
RNF31Q96EP0 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.76■□□□□ 0.75
RNF31Q96EP0 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF31Q96EP0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.76■□□□□ 0.75
RNF31Q96EP0 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF31Q96EP0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF31Q96EP0 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF31Q96EP0 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF31Q96EP0 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.75■□□□□ 0.75
RNF31Q96EP0 AC245052.3-201ENST00000450182 901 ntBASIC19.75■□□□□ 0.75
RNF31Q96EP0 RPS2P52-201ENST00000469610 820 ntBASIC19.75■□□□□ 0.75
RNF31Q96EP0 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF31Q96EP0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.75■□□□□ 0.75
RNF31Q96EP0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF31Q96EP0 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.75■□□□□ 0.75
RNF31Q96EP0 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.75■□□□□ 0.75
RNF31Q96EP0 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF31Q96EP0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF31Q96EP0 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms