Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.99■□□□□ 0.31
ZNF439Q8NDP4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF439Q8NDP4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
ZNF439Q8NDP4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
ZNF439Q8NDP4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF439Q8NDP4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF439Q8NDP4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF439Q8NDP4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF439Q8NDP4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF439Q8NDP4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF439Q8NDP4 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
ZNF439Q8NDP4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF439Q8NDP4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ZNF439Q8NDP4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
ZNF439Q8NDP4 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC16.98■□□□□ 0.31
ZNF439Q8NDP4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF439Q8NDP4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF439Q8NDP4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF439Q8NDP4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
ZNF439Q8NDP4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC16.98■□□□□ 0.31
ZNF439Q8NDP4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF439Q8NDP4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.98■□□□□ 0.31
ZNF439Q8NDP4 KRT18P20-201ENST00000548986 1279 ntBASIC16.98■□□□□ 0.31
ZNF439Q8NDP4 SLC7A5P2-201ENST00000553010 536 ntBASIC16.98■□□□□ 0.31
ZNF439Q8NDP4 AC120498.10-201ENST00000621827 505 ntBASIC16.98■□□□□ 0.31
ZNF439Q8NDP4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF439Q8NDP4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
ZNF439Q8NDP4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.98■□□□□ 0.31
ZNF439Q8NDP4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
ZNF439Q8NDP4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF439Q8NDP4 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF439Q8NDP4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZNF439Q8NDP4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF439Q8NDP4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF439Q8NDP4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF439Q8NDP4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
ZNF439Q8NDP4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF439Q8NDP4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.97■□□□□ 0.31
ZNF439Q8NDP4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF439Q8NDP4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
ZNF439Q8NDP4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.97■□□□□ 0.31
ZNF439Q8NDP4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.97■□□□□ 0.31
ZNF439Q8NDP4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC16.97■□□□□ 0.31
ZNF439Q8NDP4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.97■□□□□ 0.31
ZNF439Q8NDP4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
ZNF439Q8NDP4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF439Q8NDP4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF439Q8NDP4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
ZNF439Q8NDP4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC16.97■□□□□ 0.31
ZNF439Q8NDP4 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
ZNF439Q8NDP4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF439Q8NDP4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF439Q8NDP4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF439Q8NDP4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
ZNF439Q8NDP4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF439Q8NDP4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF439Q8NDP4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF439Q8NDP4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
ZNF439Q8NDP4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF439Q8NDP4 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF439Q8NDP4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF439Q8NDP4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF439Q8NDP4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF439Q8NDP4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF439Q8NDP4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF439Q8NDP4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF439Q8NDP4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF439Q8NDP4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF439Q8NDP4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF439Q8NDP4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF439Q8NDP4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
ZNF439Q8NDP4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF439Q8NDP4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.96■□□□□ 0.31
ZNF439Q8NDP4 AC097381.1-201ENST00000429019 1296 ntBASIC16.96■□□□□ 0.31
ZNF439Q8NDP4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.96■□□□□ 0.31
ZNF439Q8NDP4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC16.96■□□□□ 0.31
ZNF439Q8NDP4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF439Q8NDP4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC16.96■□□□□ 0.31
ZNF439Q8NDP4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
ZNF439Q8NDP4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC16.96■□□□□ 0.31
ZNF439Q8NDP4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF439Q8NDP4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.96■□□□□ 0.31
ZNF439Q8NDP4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF439Q8NDP4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
ZNF439Q8NDP4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
ZNF439Q8NDP4 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
ZNF439Q8NDP4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
ZNF439Q8NDP4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
ZNF439Q8NDP4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ZNF439Q8NDP4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
ZNF439Q8NDP4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZNF439Q8NDP4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.95■□□□□ 0.3
ZNF439Q8NDP4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
ZNF439Q8NDP4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZNF439Q8NDP4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZNF439Q8NDP4 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
ZNF439Q8NDP4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
ZNF439Q8NDP4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
ZNF439Q8NDP4 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZNF439Q8NDP4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms