Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
BEST3Q8N1M1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
BEST3Q8N1M1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BEST3Q8N1M1 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BEST3Q8N1M1 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BEST3Q8N1M1 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BEST3Q8N1M1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
BEST3Q8N1M1 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BEST3Q8N1M1 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.07■□□□□ 0.64
BEST3Q8N1M1 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
BEST3Q8N1M1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
BEST3Q8N1M1 AC007322.3-201ENST00000426526 701 ntBASIC19.07■□□□□ 0.64
BEST3Q8N1M1 FAM201B-201ENST00000458407 597 ntBASIC19.07■□□□□ 0.64
BEST3Q8N1M1 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.07■□□□□ 0.64
BEST3Q8N1M1 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.07■□□□□ 0.64
BEST3Q8N1M1 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.07■□□□□ 0.64
BEST3Q8N1M1 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
BEST3Q8N1M1 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.07■□□□□ 0.64
BEST3Q8N1M1 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BEST3Q8N1M1 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.07■□□□□ 0.64
BEST3Q8N1M1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
BEST3Q8N1M1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BEST3Q8N1M1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
BEST3Q8N1M1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BEST3Q8N1M1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.06■□□□□ 0.64
BEST3Q8N1M1 KRT17P1-201ENST00000399211 1546 ntBASIC19.06■□□□□ 0.64
BEST3Q8N1M1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.06■□□□□ 0.64
BEST3Q8N1M1 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BEST3Q8N1M1 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
BEST3Q8N1M1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
BEST3Q8N1M1 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
BEST3Q8N1M1 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.06■□□□□ 0.64
BEST3Q8N1M1 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.06■□□□□ 0.64
BEST3Q8N1M1 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
BEST3Q8N1M1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
BEST3Q8N1M1 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
BEST3Q8N1M1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.06■□□□□ 0.64
BEST3Q8N1M1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
BEST3Q8N1M1 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
BEST3Q8N1M1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BEST3Q8N1M1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BEST3Q8N1M1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BEST3Q8N1M1 SLC25A24-204ENST00000569674 2357 ntBASIC19.05■□□□□ 0.64
BEST3Q8N1M1 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
BEST3Q8N1M1 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BEST3Q8N1M1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.05■□□□□ 0.64
BEST3Q8N1M1 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.05■□□□□ 0.64
BEST3Q8N1M1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BEST3Q8N1M1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BEST3Q8N1M1 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BEST3Q8N1M1 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
BEST3Q8N1M1 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BEST3Q8N1M1 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BEST3Q8N1M1 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
BEST3Q8N1M1 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.05■□□□□ 0.64
BEST3Q8N1M1 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.05■□□□□ 0.64
BEST3Q8N1M1 CYP2T3P-201ENST00000601990 817 ntBASIC19.05■□□□□ 0.64
BEST3Q8N1M1 AC100791.3-201ENST00000617619 330 ntBASIC19.05■□□□□ 0.64
BEST3Q8N1M1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
BEST3Q8N1M1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.05■□□□□ 0.64
BEST3Q8N1M1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
BEST3Q8N1M1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
BEST3Q8N1M1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BEST3Q8N1M1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.04■□□□□ 0.64
BEST3Q8N1M1 AL137060.1-201ENST00000618151 2648 ntBASIC19.04■□□□□ 0.64
BEST3Q8N1M1 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BEST3Q8N1M1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BEST3Q8N1M1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.04■□□□□ 0.64
BEST3Q8N1M1 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BEST3Q8N1M1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BEST3Q8N1M1 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BEST3Q8N1M1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
BEST3Q8N1M1 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.04■□□□□ 0.64
BEST3Q8N1M1 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.04■□□□□ 0.64
BEST3Q8N1M1 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.04■□□□□ 0.64
BEST3Q8N1M1 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.04■□□□□ 0.64
BEST3Q8N1M1 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.04■□□□□ 0.64
BEST3Q8N1M1 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.04■□□□□ 0.64
BEST3Q8N1M1 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.04■□□□□ 0.64
BEST3Q8N1M1 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BEST3Q8N1M1 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.04■□□□□ 0.64
BEST3Q8N1M1 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.04■□□□□ 0.64
BEST3Q8N1M1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
BEST3Q8N1M1 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BEST3Q8N1M1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
BEST3Q8N1M1 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BEST3Q8N1M1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BEST3Q8N1M1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BEST3Q8N1M1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.03■□□□□ 0.64
BEST3Q8N1M1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.03■□□□□ 0.64
BEST3Q8N1M1 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BEST3Q8N1M1 MCRIP2P1-201ENST00000394346 511 ntBASIC19.03■□□□□ 0.64
BEST3Q8N1M1 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
BEST3Q8N1M1 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.03■□□□□ 0.64
BEST3Q8N1M1 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.03■□□□□ 0.64
BEST3Q8N1M1 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BEST3Q8N1M1 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.03■□□□□ 0.64
BEST3Q8N1M1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.03■□□□□ 0.64
BEST3Q8N1M1 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BEST3Q8N1M1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms