Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
LRRTM4Q86VH4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.22■□□□□ 0.83
LRRTM4Q86VH4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.22■□□□□ 0.83
LRRTM4Q86VH4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.22■□□□□ 0.83
LRRTM4Q86VH4 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
LRRTM4Q86VH4 CYP2T3P-201ENST00000601990 817 ntBASIC20.22■□□□□ 0.83
LRRTM4Q86VH4 CYP21A1P-202ENST00000354927 1481 ntBASIC20.22■□□□□ 0.83
LRRTM4Q86VH4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRRTM4Q86VH4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRTM4Q86VH4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRTM4Q86VH4 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRTM4Q86VH4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.21■□□□□ 0.83
LRRTM4Q86VH4 CLDN5-201ENST00000403084 2357 ntBASIC20.21■□□□□ 0.83
LRRTM4Q86VH4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.21■□□□□ 0.83
LRRTM4Q86VH4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRTM4Q86VH4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
LRRTM4Q86VH4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
LRRTM4Q86VH4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LRRTM4Q86VH4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRTM4Q86VH4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
LRRTM4Q86VH4 AL355472.2-201ENST00000422958 438 ntBASIC20.21■□□□□ 0.83
LRRTM4Q86VH4 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRTM4Q86VH4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRTM4Q86VH4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
LRRTM4Q86VH4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LRRTM4Q86VH4 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRTM4Q86VH4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRTM4Q86VH4 AC121338.2-201ENST00000622535 1744 ntBASIC20.21■□□□□ 0.83
LRRTM4Q86VH4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.21■□□□□ 0.83
LRRTM4Q86VH4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LRRTM4Q86VH4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRTM4Q86VH4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRTM4Q86VH4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.2■□□□□ 0.82
LRRTM4Q86VH4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
LRRTM4Q86VH4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRTM4Q86VH4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRTM4Q86VH4 AC092118.2-201ENST00000613495 667 ntBASIC20.2■□□□□ 0.82
LRRTM4Q86VH4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.2■□□□□ 0.82
LRRTM4Q86VH4 AC133041.1-202ENST00000642053 222 ntBASIC20.2■□□□□ 0.82
LRRTM4Q86VH4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.2■□□□□ 0.82
LRRTM4Q86VH4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRTM4Q86VH4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRTM4Q86VH4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRTM4Q86VH4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.19■□□□□ 0.82
LRRTM4Q86VH4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRTM4Q86VH4 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.19■□□□□ 0.82
LRRTM4Q86VH4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRTM4Q86VH4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRTM4Q86VH4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRTM4Q86VH4 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.19■□□□□ 0.82
LRRTM4Q86VH4 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRTM4Q86VH4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRTM4Q86VH4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRTM4Q86VH4 LSM12P1-201ENST00000411836 588 ntBASIC20.19■□□□□ 0.82
LRRTM4Q86VH4 AC073210.2-201ENST00000430369 194 ntBASIC20.19■□□□□ 0.82
LRRTM4Q86VH4 AC069152.1-201ENST00000438030 544 ntBASIC20.19■□□□□ 0.82
LRRTM4Q86VH4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.19■□□□□ 0.82
LRRTM4Q86VH4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.19■□□□□ 0.82
LRRTM4Q86VH4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
LRRTM4Q86VH4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.19■□□□□ 0.82
LRRTM4Q86VH4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.19■□□□□ 0.82
LRRTM4Q86VH4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LRRTM4Q86VH4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRTM4Q86VH4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
LRRTM4Q86VH4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRTM4Q86VH4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRTM4Q86VH4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRTM4Q86VH4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LRRTM4Q86VH4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRTM4Q86VH4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRTM4Q86VH4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
LRRTM4Q86VH4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRTM4Q86VH4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRTM4Q86VH4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRTM4Q86VH4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRTM4Q86VH4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LRRTM4Q86VH4 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRTM4Q86VH4 KRT18P68-201ENST00000392293 1000 ntBASIC20.18■□□□□ 0.82
LRRTM4Q86VH4 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.18■□□□□ 0.82
LRRTM4Q86VH4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
LRRTM4Q86VH4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.18■□□□□ 0.82
LRRTM4Q86VH4 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.18■□□□□ 0.82
LRRTM4Q86VH4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.18■□□□□ 0.82
LRRTM4Q86VH4 AC098934.4-201ENST00000564127 592 ntBASIC20.18■□□□□ 0.82
LRRTM4Q86VH4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRTM4Q86VH4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LRRTM4Q86VH4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LRRTM4Q86VH4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
LRRTM4Q86VH4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LRRTM4Q86VH4 KRT17P1-201ENST00000399211 1546 ntBASIC20.17■□□□□ 0.82
LRRTM4Q86VH4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.17■□□□□ 0.82
LRRTM4Q86VH4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LRRTM4Q86VH4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
LRRTM4Q86VH4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.17■□□□□ 0.82
LRRTM4Q86VH4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.17■□□□□ 0.82
LRRTM4Q86VH4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRTM4Q86VH4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
LRRTM4Q86VH4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.17■□□□□ 0.82
LRRTM4Q86VH4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.17■□□□□ 0.82
LRRTM4Q86VH4 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms